Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00237 ATGGAGGATCTCGAGGAGGAAGAGAACGGAGCGGAGGAGGTGTTGGGGTCAAGCTTGACCATGGAGAAGGTGGCGGCGGCCAAGAAGTTCATTGAGAATCATTATAGGGCTCAGATGAAGAACATCCAAGAGAGGAAGGAGAGGCGTTGGGTTTTAGAAAGAAAATTGGCATCGTCAGATGTGCCAAATGAGGAGCGGATCAACCTCATCAAAGATTTAGAGAGGAAGGAGACTGAATATATGCGATTGAAAAGGCACAAGATTTGTGTTAATGATTTTGAACTTTTGACCATCATTGGAAGGGGGGCTTTTGGGGAGGTTAGACTGTGTCGGGAGAAGAAATCTGGAAATATTTATGCTATGAAAAAGCTGAAGAAATCTGAAATGCTTAGGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTGCTAGCTGAAGTTGCCAGTCATTGCATTGTGAAACTTTACTACTCATTTCAGGATGCTGAGTACTTGTATTTAATTATGGAGTATCTGCCTGGGGGTGACGTTATGACTCTGCTGATGAGGGAAGACACCTTAAGTGAAAATGTTGCTAGATTTTACATTGCACAGAGTGTTCTGGCCATAGAATCTATTCACAAACACAATTACATTCACAGAGATATTAAACCTGATAACCTTCTTCTGGATAAAAATGGTCACATGAAGCTCTCTGATTTTGGTCTCTGTAAGCCTCTCGATTGTATTGCCTTGTCTACACTGCATGAAAATCAGACCATGGATGATGAAACTTTGGCAGAACCAATGGATGTTGATGATGCGGACAATCGGAGCAGCTGGAGAAGTCCACGTGAACAACTTCAACATTGGCAGATGAACAGGAGGAAGTTGGCATTTTCAACAGTGGGGACACCAGACTACATTGCTCCTGAAGTACTTTTGAAAAAAGGATATGGGATGGAATGTGATTGGTGGTCACTGGGAGCAATAATGTATGAAATGCTGGTTGGTTACCCTCCATTTTACTCCGATGACCCAATAACCACATGCAGAAAGATTGTTCATTGGAGAAATCATTTAAGATTTCCAGAAGATGCCCAGTTAACACTTGAGGCTAAGGATCTAATTTATAGGTTGCTGTGTGATGTTGATCATAGGTTAGGTACTCGAGGGGCCAATGAAATAAAGGCTCATCCTTGGTTCAAGGGTGTGGAGTGGGACAAACTGTATGAAATGGAGGCAGCATTTAAACCTCAAGTCAACGGGGAGCTGGATACCCAAAACTTCATGAAGTTTGATGAGGTAGATCCACCAGCAGCGGCAAGAACTGGGTCTGGATCCTCACGAAAGATGCTAACTACCAAAGATCTAAGCTTTGTTGGTTACACTTACAAGAACTTTGATGCTGTAAAGGAAGGGCTTCGTCAATCTTTTGGTGATTCCATGCAAGAGTATGCTTCTAAACGGGCAGCTGAAGAAACAAGTTTACAAATGCTTGCGTCCTCTGGAGATCCCATGTTACCATAA 1512 0.4306 MEDLEEEENGAEEVLGSSLTMEKVAAAKKFIENHYRAQMKNIQERKERRWVLERKLASSDVPNEERINLIKDLERKETEYMRLKRHKICVNDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLRRGQVEHVRAERNLLAEVASHCIVKLYYSFQDAEYLYLIMEYLPGGDVMTLLMREDTLSENVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCIALSTLHENQTMDDETLAEPMDVDDADNRSSWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWRNHLRFPEDAQLTLEAKDLIYRLLCDVDHRLGTRGANEIKAHPWFKGVEWDKLYEMEAAFKPQVNGELDTQNFMKFDEVDPPAAARTGSGSSRKMLTTKDLSFVGYTYKNFDAVKEGLRQSFGDSMQEYASKRAAEETSLQMLASSGDPMLP 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00237 503 FunFam Non-specific serine/threonine protein kinase 415 425 - -
Pumo10g00237 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Pumo10g00237 503 SMART pkinase_C_6 397 461 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pumo10g00237 503 ProSiteProfiles Protein kinase domain profile. 93 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00237 503 Pfam Protein kinase C terminal domain 415 459 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pumo10g00237 503 CDD STKc_NDR_like 91 460 - -
Pumo10g00237 503 ProSiteProfiles AGC-kinase C-terminal domain profile. 397 469 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pumo10g00237 503 SUPERFAMILY Protein kinase-like (PK-like) 76 445 IPR011009 -
Pumo10g00237 503 SMART serkin_6 93 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00237 503 CDD MobB_NDR_LATS-like 27 88 - -
Pumo10g00237 503 Gene3D Transferase(Phosphotransferase) domain 1 291 414 - -
Pumo10g00237 503 Gene3D Transferase(Phosphotransferase) domain 1 177 241 - -
Pumo10g00237 503 FunFam Non-specific serine/threonine protein kinase 177 244 - -
Pumo10g00237 503 FunFam Non-specific serine/threonine protein kinase 295 414 - -
Pumo10g00237 503 FunFam Non-specific serine/threonine protein kinase 54 176 - -
Pumo10g00237 503 Gene3D Phosphorylase Kinase; domain 1 415 425 - -
Pumo10g00237 503 Gene3D Phosphorylase Kinase; domain 1 91 176 - -
Pumo10g00237 503 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Pumo10g00237 503 Pfam Protein kinase domain 94 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00237 503 Pfam Protein kinase domain 288 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00237 503 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00237 Pumo-Chr10 3238229 3247721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00237 1 502 AGC Kinase Gene Family AT4G33080 80.784 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pumo10g00237 Pkinase 8.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00237 K08790 - gmx:100815717 1002.28