Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00234 ATGTGCACCGTGATCCTTTCTTTTCGTATCAATGGTGCCAAAATGACAGATAAAAATCCAAGACCACCAGATTCACCTGACAATGAATTCACCAACCAATGGCCTTTGGAGGTCTCTGAGTACTTGAATTTTGATGATGATCCGGATTCATTTGTTTCTGGGCATGTCTTCAGCCATAACAATCAAGCCAATGAAGTTGGTGACTTTGGAGGAAGTAGCACCCACTTTGTAGAGTCTTCTACCAGAGATGCTGGCAATGAACGTGAGAAGAAGGAAGTCAAAGACAGAGTTGCATTCAAAACAAAGTCAGAGGTAGAAATACTGGACGATGGGTTCAAGTGGAGGAAGTACGGAAAGAAGATGGTTAAAAACAGCCCCAATCCAAGGAACTACTATAGGTGTTCAGTGGACGGATGCCAGGTCAAAAAGAGAGTTGAAAGAGATAAGGATGATCCAAGAGATACTGCAAAGAAAGGCCCAAACCTAGCCAAACATGAGAGTATTCTTATGAGTCAACTCATGGTACTTGGGTTATTCAGCTGCAATGCTGAGGAAAACTTAGCCCATAGTCACATAATTCGTGGTACTTTTCGGTACGTGGTACGAATTCGGGTACGTGGTTTTCTCTTGCAACTGCATAGGATCTTTTCATTCTTCCTGGTTCGTCTCCTCAACGAATTCATCGACGAATTTTGGGGTCCCGGTTCGAAAACGAACCACGAATTGGTTCGTACGAACCAATTCGCGATTCTTTGGCCAAACCACGAATTATGTGACTATGACTTAGCCAATGCGCAGGTCTAA 804 0.4341 MCTVILSFRINGAKMTDKNPRPPDSPDNEFTNQWPLEVSEYLNFDDDPDSFVSGHVFSHNNQANEVGDFGGSSTHFVESSTRDAGNEREKKEVKDRVAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYRCSVDGCQVKKRVERDKDDPRDTAKKGPNLAKHESILMSQLMVLGLFSCNAEENLAHSHIIRGTFRYVVRIRVRGFLLQLHRIFSFFLVRLLNEFIDEFWGPGSKTNHELVRTNQFAILWPNHELCDYDLANAQV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00234 267 SMART WRKY_cls 108 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g00234 267 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 68 153 IPR044810 GO:0003700
Pumo10g00234 267 MobiDBLite consensus disorder prediction 13 32 - -
Pumo10g00234 267 SUPERFAMILY WRKY DNA-binding domain 101 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g00234 267 Gene3D WRKY domain 95 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g00234 267 Pfam WRKY DNA -binding domain 109 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g00234 267 ProSiteProfiles WRKY domain profile. 103 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00234 Pumo-Chr10 3148389 3153516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00234 26 152 WRKY Transcription Factor Family AT5G26170 51.748 8.21e-36 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo10g00234 WRKY 6.9e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00234 - - gmx:100808823 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00234 10 3148389 3153516 Pumo10g00234 10 3148389 3153516 ECH