Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00231 ATGTTTCACTTATTCACACTAATCCACCCCCGCAACATCAAAAAAAAAAAGAAAAAGAAAAAAAGACACCCTCCTAAATCTGTGTTATTTTCATTCATTTTGTCCCTGTTGTTCTTTCTTTCTATTTTTAGTATAAAAAAAAAAAAAAAAGCAAACCCTACTAGTACTCTGAAATCCTCCAAAGTGGCGAAGATGAGTTTGGGAACCGCGGAGGACGATTCGGGTTCAGAAATTCACATCCCGGCGGAGATTGATTGGCACATGCTGGACAAGTCCAAGTTCTTCTTCCTCGGCGCCGCCTTATTCTCCGGCGTCTCCTTCGCACTCTATCCCATGGTCGTGTTGAAGACGCGCCAGCAAGTTTCCTCGTCACGCTTCTCGTGCCTCAACATGTCCTGCGCCATTATGCGCTACGAGGGCTTCAGAGGCTTCTACAAAGGCTTCGGCACTTCCCTCATGGGCACCATCCCCGCGCGTGCACTCTACATGGCCTCGCTCGAAGTCACAAAGAGCAACGTCGGCACCGCTTTCGTCGAATTGGGCTTCTCGGAAACCACGGCGGTGGCGGTGGCTAATGCCGCCGCGGGTGTTACCTCCGCCATGGCGGCGCAGCTGGTGTGGACCCCAATCGATGTCGTGAGTCAACGGCTCATGGTTCAGGGGAGTGGAAGGAGCAAAACCGTGCTTGCAAATCTCAATTCCGAGAGTTACAGAAACGGTTTTGATGCTTTTAGGAAAATTCTGTGTGCTGATGGAGCAAGAGGGTTTTATAGAGGGTTTGGGATTTCTATATTGACTTATGCGCCTTCCAATGCGGTTTGGTGGACTTCTTATTCCATGGTGCATAGACTCATTTGGGGTGCTTTTGGTTCTTACATTATGGGTAATAAGGGTAGTAAGGGAAATGAAAAGAGTGATAATTTGGGTGGGTTTAGGCCTGATTCGAAGGCAATGGTGGCGGTTCAAGGGTTGAGTGCGGTTATGGCTAGTGGGGTATCTGCGATTGTGACAATGCCGCTTGATACGATTAAGACGAGGTTGCAGGTGTTGGATACTGAAGAGAATGGGAGAAGGAGGCCTTTGACTTTTGTTCAGACAGTGAGGAATTTGGTGAAGGAAGGTGGGTTGCTTGCTTGTTACAGAGGATTGGGACCGAGATGGGCTTCCATGTCCATGTCTGCTACAACTATGATTACTACTTATGAGTTTTTGAAACGAATGTCTACCAAGAGTCTAGAGGATTTGACTTCATCATAG 1257 0.4773 MFHLFTLIHPRNIKKKKKKKKRHPPKSVLFSFILSLLFFLSIFSIKKKKKANPTSTLKSSKVAKMSLGTAEDDSGSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSFALYPMVVLKTRQQVSSSRFSCLNMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMASLEVTKSNVGTAFVELGFSETTAVAVANAAAGVTSAMAAQLVWTPIDVVSQRLMVQGSGRSKTVLANLNSESYRNGFDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGSYIMGNKGSKGNEKSDNLGGFRPDSKAMVAVQGLSAVMASGVSAIVTMPLDTIKTRLQVLDTEENGRRRPLTFVQTVRNLVKEGGLLACYRGLGPRWASMSMSATTMITTYEFLKRMSTKSLEDLTSS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00231 418 Gene3D Mitochondrial carrier domain 27 228 IPR023395 -
Pumo10g00231 418 Gene3D Mitochondrial carrier domain 229 417 IPR023395 -
Pumo10g00231 418 ProSiteProfiles Solute carrier (Solcar) repeat profile. 187 284 IPR018108 -
Pumo10g00231 418 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 74 411 - -
Pumo10g00231 418 SUPERFAMILY Mitochondrial carrier 87 404 IPR023395 -
Pumo10g00231 418 ProSiteProfiles Solute carrier (Solcar) repeat profile. 317 407 IPR018108 -
Pumo10g00231 418 Pfam Mitochondrial carrier protein 320 410 IPR018108 -
Pumo10g00231 418 Pfam Mitochondrial carrier protein 99 172 IPR018108 -
Pumo10g00231 418 Pfam Mitochondrial carrier protein 190 286 IPR018108 -
Pumo10g00231 418 ProSiteProfiles Solute carrier (Solcar) repeat profile. 90 172 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00231 Pumo-Chr10 3097096 3099045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00231 77 410 Chloroplast and Mitochondria Gene Families AT5G26200 68.155 1.62e-161 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00231 K15121 - gmx:100815068 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00231 10 3097096 3099045 Pumo10g00231 10 3097096 3099045 ECH
Pumo10g00231 10 3097096 3099045 Pumo9g00472 9 7400446 7402274 ECH