Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00223 ATGAATTTGAGTCAGAGCCCTCGTACTCAGAAGAACCTTTCTCGGCAGTCATCAAAGTCAAATAGAGGGGTGAAGCAAGAGGCAGCTGCTGCTAGCCCTCTCCCAAGTGGATGCTGTCGAGGTTTGAGCAGTGTTAGGACTGTGTCATCCACCGCACCAACCTTGCAACACCATCAGCGTTATGAAAAATTGCAAGTAAAGGTGGCAGGTTTGGAAAAAGAGGTGCAAAGGCAGACAGAACTCCGAGTCATGTATCGGAAAAGAATGGAAAGGACACAAGATTACTTAAAATACTGTCTCCAAATAGCGCAGGAAAATGGAATCTTGGACCTCATTATCCACTCCAAAGGTGAACTCTCACATTCTCCCCTCGACTCCACTCCCACCACTCCTTCGCACCACCACCCCAATCTAACGGCCATCATTGATCAAGCCAAAATCAATGGATGGTATATTAACCCAACTGAGATTGAGTTGGGAGAAAAAATAGGGCAGGGAACCACGGCAGACATTCATAGAGGGACATGGCGTGGATTTGATGTGGCGGTGAAGTGCATGTCCACTTCATTCTTCCGCGCAAATGAAAACGGTGTCGTTTTCTTCCAACAGGAGCTCGAAACCCTCTCAAGGCAGCGCCACCGGTTTGTGCTTCACCTCATGGGTGCGTGTCTTGAGCCTCCTCATCATGCATGGATAGTTACCGAACATCTGAACACCACGCTGAAGGAGTGGCTACATGGGCCGGGCAAAAGGCCCAATAACAGAACCGTGCCACTTCCTCCCTTCAAAGACAGAGTGATGCGGGCCTTGGAAATAGCCCAAGCCATGCAGTATCTCCACGAGCAAAAGCCCAAAGTGGTTCATCGTGACTTGAAGCCCAGCAACATCTTCTTGGACGATGCATTGCATGTTAGGGTTGCGGATTTTGGACATGCACGCTTCTTGGGTGATGACGAAATGGCTCTCACCGGAGAAACAGGCAAGTCCTTAATGTTGTTTTTATTTTTTTCAGGAACATACGTGTATATGGCACCGGAGGTAATCCGATGTGAGCCCTATAATGAAAAATGTGATGTATACAGTTTTGGAATCATACTGAATGAGCTACTTACTGGAAAATACCCTTATATTGAGACAGATTTTGGTCCTGCCAAGGTTGCTATGGAAGTTGTGGAGGGCAAGCTAAGGCCTGTGCTTCCATCAAGGGATGAAGGCGACCAACTGGGAGAGCTGACTGACCTAATATGCCTTTGCTGGGATGGAAATTCATCCACTCGACCATCTTTTGCAACAATTAGTCATAGCCTCACAAGCTATGTCAAGAGGGTCCTCCAAATTTCTAGTTAG 1347 0.4751 MNLSQSPRTQKNLSRQSSKSNRGVKQEAAAASPLPSGCCRGLSSVRTVSSTAPTLQHHQRYEKLQVKVAGLEKEVQRQTELRVMYRKRMERTQDYLKYCLQIAQENGILDLIIHSKGELSHSPLDSTPTTPSHHHPNLTAIIDQAKINGWYINPTEIELGEKIGQGTTADIHRGTWRGFDVAVKCMSTSFFRANENGVVFFQQELETLSRQRHRFVLHLMGACLEPPHHAWIVTEHLNTTLKEWLHGPGKRPNNRTVPLPPFKDRVMRALEIAQAMQYLHEQKPKVVHRDLKPSNIFLDDALHVRVADFGHARFLGDDEMALTGETGKSLMLFLFFSGTYVYMAPEVIRCEPYNEKCDVYSFGIILNELLTGKYPYIETDFGPAKVAMEVVEGKLRPVLPSRDEGDQLGELTDLICLCWDGNSSTRPSFATISHSLTSYVKRVLQISS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00223 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Pumo10g00223 448 Coils Coil 61 81 - -
Pumo10g00223 448 ProSitePatterns Protein kinases ATP-binding region signature. 163 184 IPR017441 GO:0005524
Pumo10g00223 448 CDD STKc_MAP3K-like 163 436 - -
Pumo10g00223 448 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 38 436 - -
Pumo10g00223 448 SUPERFAMILY Protein kinase-like (PK-like) 130 434 IPR011009 -
Pumo10g00223 448 SMART serkin_6 157 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00223 448 MobiDBLite consensus disorder prediction 1 34 - -
Pumo10g00223 448 ProSiteProfiles Protein kinase domain profile. 157 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00223 448 Gene3D Transferase(Phosphotransferase) domain 1 238 446 - -
Pumo10g00223 448 Gene3D Phosphorylase Kinase; domain 1 145 237 - -
Pumo10g00223 448 Pfam Protein kinase domain 159 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00223 448 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00223 Pumo-Chr10 3027263 3029609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00223 148 443 MAP Kinase Kinase Kinase AT2G17700 34.007 8.69e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Pumo10g00223 Pkinase 5.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00223 - - gmx:100810435 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00223 10 3027263 3029609 Pumo10g00223 10 3027263 3029609 ECH