Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00180 ATGGGTTATCTCAATTCAGTTTTGTCCTCCTCAAGCCAGGTTCATGCTGCAGATGATGCTATTGTGAGCGGTGGGGGTCTAAGTCATAATGGAAAATTCAGCTACGGGTACGCTAGCTCTCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGATGGTGAAATCGTTGGCCTTTTCGGAGTTTTTGATGGTCATGGTGGTGTTCGTGCTGCTGAGTATGTCAAGAAAAACCTGTTTAGTAATTTGATCAGTCACCCAAAATTCATTTCTGACACCAAATCAGCAATAGCTGATGCATATAATCATACCGACTCTGAGTTTCTGAAATCAGAAAATAGCCATAACAGAGATGCGGGATCAACTGCTTCCACTGCTATTTTAGTTGGTGACCGCTTGCTTGTTGCAAATGTTGGGGATTCCAGAGCTGTTATATGCAGGGGTGGTAATGCCATTGCTGTTTCTCGTGATCACAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAGAAGCAGGAGGCTTTGTCATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAGCAATATGTTGTTGCTGATCCAGAAATTCAGGAAGAAAAAGTTGACAGCTCCCTTGAGTTTCTTATTCTGGCCAGTGACGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTTTCTATGATTAAACCAATTGAGGATGCTGAGGAGGCAGCAAAGAGGCTGATGCAAGAAGCATATCAGAGAGGTAGTGCTGACAATATCACATGTGTTGTTGTTCGTTTCTTGACGAACCAAGGTGGATCCAAAGAGGTAGTAGCTTCTTCTCATAGTAGCTCTGGGGGTAAGAATCCTTCAGTAGAAGGTTTGTGTGATAGGTGA 936 0.438 MGYLNSVLSSSSQVHAADDAIVSGGGLSHNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGVRAAEYVKKNLFSNLISHPKFISDTKSAIADAYNHTDSEFLKSENSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEEAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVSMIKPIEDAEEAAKRLMQEAYQRGSADNITCVVVRFLTNQGGSKEVVASSHSSSGGKNPSVEGLCDR 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00180 311 SMART PP2C_4 24 278 IPR001932 -
Pumo10g00180 311 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Pumo10g00180 311 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Pumo10g00180 311 CDD PP2Cc 33 280 IPR001932 -
Pumo10g00180 311 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Pumo10g00180 311 Gene3D - 26 285 IPR036457 -
Pumo10g00180 311 FunFam probable protein phosphatase 2C 59 26 284 - -
Pumo10g00180 311 PANTHER PROTEIN PHOSPHATASE 28 279 IPR015655 GO:0004722|GO:0006470
Pumo10g00180 311 MobiDBLite consensus disorder prediction 291 311 - -
Pumo10g00180 311 SMART PP2C_SIG_2 29 280 IPR001932 -
Pumo10g00180 311 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00180 Pumo-Chr10 2515031 2519839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00180 1 286 PP2C-type Phosphatase Gene Family AT4G31750 91.608 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00180 K17506 - gmx:100797070 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00180 10 2515031 2519839 Pumo10g00180 10 2515031 2519839 ECH