Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00166 ATGACTAAGATCAGATCGAATCGGAAGGCTGGAGTCAAATCCGGGCCAGGGATATGCTTCAACGCTGCGAGTGTGAAACAGAAACAAGAAGAAAGGGATAAGAACAAAGAAAATCCAAGAGAGAGAAAGAATGAAAATGTTCCCACTCAGATAGGAATGGGAATATATCTCAGCACTCCAAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACCGTCTTAGATATGGTTTATCGTCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCCCATGCTGCATATACTGATCTGGATGAGTCAACTTCATTTTTTGGTGTCTATGATGGTCACGGAGGTAAGGTGGTTGCAAAGTTTTGTGCTAAGTTTCTTCACCAACAGGTGCTCAAAAGTGAGGCATACTTAACTGGAGATATAGGAAACTCCCTTCAGAAAGCCTTTTTAAGAATGGATGAGATGATGCGTGGTCAAAGGGGATGGAGGGAATTATCAATATTGGGGGATAAGATTAACAAGTTTACTGGGATGATAGAAGGGTTGATTTGGTCTCCACGAAGCAGTGATGGTAATTGCCAAGTTGATGATTGGGCTTTTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCGGGAAGCACTGCCTGTGTTGCAGTTATTAGAAACAACCAACTTCTTGTTGCAAATGCTGGTGATTCGCGATGTGTGATATCCCGGAAGGGCCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCATGCAGGACGAGTTAATGGAAGTTTAAATCTTGCAAGAGCTATTGGTGACATGGAATTTAAACAGAATAAGTTTCTTCCTGCTGAAAAACAAATTGTAACTGCCAATCCAGACATAAACACTGTTGAGCTTTGTGATGAAGATGAATTTGTCGTGTTAGCTTGTGATGGCATATGGGATTGCATGTCAAGTCAACAACTGGTAGATTTTGTTCATGAACAATTGCACTCGGAAACGAAACTTTCTGCAGTGTGTGAAAGTGTACTTAACCGGTGTTTGGCACCATCAACTGCCAGTGGTGAGGGATGTGACAACATGACCATGATTGTGGTGCAGTTCAAAAGACCTGCTCAGTCCAGTGCACCAGCAGAAGAGCAATCCTCTTCAAACGGACAAGCAGAACCTGAAATAAAACTAGAGAGAAGTGAAAGTTAG 1239 0.4221 MTKIRSNRKAGVKSGPGICFNAASVKQKQEERDKNKENPRERKNENVPTQIGMGIYLSTPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYTDLDESTSFFGVYDGHGGKVVAKFCAKFLHQQVLKSEAYLTGDIGNSLQKAFLRMDEMMRGQRGWRELSILGDKINKFTGMIEGLIWSPRSSDGNCQVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNQLLVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDINTVELCDEDEFVVLACDGIWDCMSSQQLVDFVHEQLHSETKLSAVCESVLNRCLAPSTASGEGCDNMTMIVVQFKRPAQSSAPAEEQSSSNGQAEPEIKLERSES 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00166 412 SMART PP2C_SIG_2 80 381 IPR001932 -
Pumo10g00166 412 MobiDBLite consensus disorder prediction 1 47 - -
Pumo10g00166 412 MobiDBLite consensus disorder prediction 387 403 - -
Pumo10g00166 412 SMART PP2C_4 65 379 IPR001932 -
Pumo10g00166 412 MobiDBLite consensus disorder prediction 382 412 - -
Pumo10g00166 412 Pfam Protein phosphatase 2C 75 156 IPR001932 -
Pumo10g00166 412 Pfam Protein phosphatase 2C 207 366 IPR001932 -
Pumo10g00166 412 PANTHER PROTEIN PHOSPHATASE 2C 36 380 IPR015655 GO:0004722|GO:0006470
Pumo10g00166 412 SUPERFAMILY PP2C-like 55 383 IPR036457 -
Pumo10g00166 412 ProSiteProfiles PPM-type phosphatase domain profile. 75 381 IPR001932 -
Pumo10g00166 412 MobiDBLite consensus disorder prediction 26 44 - -
Pumo10g00166 412 CDD PP2Cc 75 381 IPR001932 -
Pumo10g00166 412 ProSitePatterns PPM-type phosphatase domain signature. 104 112 IPR000222 GO:0043169
Pumo10g00166 412 Gene3D - 52 382 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00166 Pumo-Chr10 2387116 2394378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00166 53 393 PP2C-type Phosphatase Gene Family AT2G25070 77.713 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00166 K17499 - gmx:100787778 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00166 10 2387116 2394378 Pumo10g00166 10 2387116 2394378 ECH
Pumo9g00496 9 8003228 8009688 Pumo10g00166 10 2387116 2394378 PCT