Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00161 ATGGCTGGTTGTTCAAGAACTGTCTCTGCTTCTCTTTTGTTCCTTTTCCTTCTCTTTGGATTCTCAGCAGCTAAGGAACTATTGGTTGGAGGCAAAATAGATGCTTGGAAGATTCCATCTTCTGAATCAGATTCCCTCAATCAATGGGCTGAAAGGTCTCGTTTCAGAGTGGGCGATCATCTTGTGTGGAAATATGAGAGTGGGAAAGACTCAGTGTTGGAAGTAACAAGAGAAGATTATGCTAATTGCAGCACATCCAACCCTATCAAAGAGTACAGTGATGGGAACACAAAGGTGAAGCTTGAGCGTTCTGGTCCATTCTACTTCATCAGTGGAGCAAAGGGGCACTGTGAGAAGGGGCAAAAGTTGATTGTGGTGGTTATGTCTCCAAGGCACACATTCAGTGCCATTTCTCCAGCACCTTCTCCAGCAGAGTTCGAGGGTCCAGCTGTTGCTCCTACTAGCAGTGCCACACCGTTTCAAGTTGGTCTTCTCACTGCTCTCGGAGTGTTGGCTATGTATGTGGGTGCTTTCATGTAA 540 0.4611 MAGCSRTVSASLLFLFLLFGFSAAKELLVGGKIDAWKIPSSESDSLNQWAERSRFRVGDHLVWKYESGKDSVLEVTREDYANCSTSNPIKEYSDGNTKVKLERSGPFYFISGAKGHCEKGQKLIVVVMSPRHTFSAISPAPSPAEFEGPAVAPTSSATPFQVGLLTALGVLAMYVGAFM 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00161 179 Gene3D - 23 132 IPR008972 -
Pumo10g00161 179 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Pumo10g00161 179 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Pumo10g00161 179 PANTHER BLUE COPPER PROTEIN 26 139 IPR039391 GO:0009055
Pumo10g00161 179 FunFam Early nodulin-like protein 1 24 132 - -
Pumo10g00161 179 CDD OsENODL1_like 25 128 IPR041846 -
Pumo10g00161 179 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00161 Pumo-Chr10 2361898 2362817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00161 11 163 Phytocyanin Superfamily AT2G25060 61.039 1.89e-64 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00161 - - gmx:100305551 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00161 10 2361898 2362817 Pumo10g00161 10 2361898 2362817 ECH
Pumo9g00502 9 8039777 8041206 Pumo10g00161 10 2361898 2362817 PCT