Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00153 ATGGATGAAGAGGTAGAAACGCTTGAAGCGAAGCTGCAACATGTGAAAGAGGAGAATCGTACTCTAAGAGTGATGCTGGAAACTCTGAGCAGCAACTGCGAGAAGCTTCAATCTCATCTTCAAGAGATCAACAATGAAGAACAAGTGGGCACCAAGTCAGACCAAAGTGGATCAGTATTAACTACTAGACCCGAGTTTTCCATAGCACGAAAGCCATCACAAATCTTTGTTAAAACTCACCCCAAGGACAATAGTTTGATGGTAAAAGATGGTTATCAGTGGAAGAAATATGGACAGAAGAAGGTTACCAAAGACAATCCTTCCCCTAGAGCTTATTTCAGGTGCTCCCTGGCTCCTAGTTGCCCCGTCAAGAAAAGGGTGCAAAGAAGTATTCAGGATAGGTCCATCCTTGTTGTAACTTATGAAGGAAAACACAACCATGGTGTTTTCCGTGATTTACTCAAGCCATCATCATCTACACACGAAGCCTCAATAATGGCTAATAATTTACCTATGACAATCATGCCAAACGGCAAAGATACTATGAACATTGACCTTTGTCTATGTAATCGAGCTCAAACAGATATAAGACTCTGTGACGATGTCAAGCAACAGAACGACCGTGGCAGCAACAGCAAAATTGAAGAATATGTAAGTTCTCTAGTCAAAGATCCTGACTTCATCATACCATTAGCTGAAGCAGTTGTGCACTCCATCAATTGCCAGAGTAAGCAAGTGGGTCTTAACCTGAATTTGGGTCTTCCAGAACCCCACTTGTGA 780 0.4218 MDEEVETLEAKLQHVKEENRTLRVMLETLSSNCEKLQSHLQEINNEEQVGTKSDQSGSVLTTRPEFSIARKPSQIFVKTHPKDNSLMVKDGYQWKKYGQKKVTKDNPSPRAYFRCSLAPSCPVKKRVQRSIQDRSILVVTYEGKHNHGVFRDLLKPSSSTHEASIMANNLPMTIMPNGKDTMNIDLCLCNRAQTDIRLCDDVKQQNDRGSNSKIEEYVSSLVKDPDFIIPLAEAVVHSINCQSKQVGLNLNLGLPEPHL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00153 259 Coils Coil 5 46 - -
Pumo10g00153 259 Gene3D WRKY domain 73 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g00153 259 Pfam WRKY DNA -binding domain 89 147 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g00153 259 ProSiteProfiles WRKY domain profile. 83 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g00153 259 SMART WRKY_cls 88 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g00153 259 SUPERFAMILY WRKY DNA-binding domain 85 149 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g00153 259 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 4 52 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00153 Pumo-Chr10 2301056 2302309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00153 63 235 WRKY Transcription Factor Family AT1G80840 40.984 5.94e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo10g00153 WRKY 8.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00153 - - gmx:121175041 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g00511 9 8183228 8197145 Pumo10g00153 10 2301056 2302309 PCT