Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00152 ATGGAACCAACGTGCGTCGACACTTCGCTCAACCTTAACGTTATTCCCTCTCCACACATCGACATCGCGGCAGAAGTTTTGCTTGAAGAGTTGCGGCGTCTAAGTAGTGAGAATAAGAGGCTAACTGAGACGCTGAACCACGTCTGCGAGAACTATGTTGCTTTGCAGAAACATTTAAATGAATTCGGCCAACTGAGGAATGAAAATTTTGTTAAAGAAGAAACACCATCGCTGAAGAGAAAGGCCGAGAGTGAGAATTGTGTGAATCTGTTTGGTATTAATGCCTATACTGAGTGCAGCACTACCACTGAGGAAGAGACATTCAAAAGGCCTAAGCATAGCACCTCGCCAAAGATTTCCAAGGTTTTTGTACGGACAGATGCATCCGATACCGGCTTATACATGAGAGACGGATATCAATGGAGAAAATATGGTCAAAAAGTTACCAGAGATAACCCTTCTCCTAGGGCTTACTTCAAGTGCTCCTATGCCCCAAGCTGCCCAGTGAAGAAGAAGGTGCAAAGAAGTGTGGAAGATCCAAGTGTGTTGGTGACAACTTATGAAGGAGAGCACAATCATGGCCAACATCATCAAAGTGCAGAAATATCAGTGAATTCAAGCCGAAGTGAATCCCCTGCAGCTAGTGCCTCACCTTCTCCCTCACCCATGAATAATCGGAGTGCAGGTCCAATTGTAACGCTTGACTTGGTCCAGTCAAAAGTGGTTGACATTAATGAGCAAAAGTCATCTCTCCAGAAGTTTTTAGTTCAACAAATGGCTACTTCTTTGACTAAAGATCCCAATTTCACAGCCGCACTTGCTACTGCCATCTCAGGAAGAATTCTAGACGATACTTCTGTGGGAAAACGTTGA 873 0.4433 MEPTCVDTSLNLNVIPSPHIDIAAEVLLEELRRLSSENKRLTETLNHVCENYVALQKHLNEFGQLRNENFVKEETPSLKRKAESENCVNLFGINAYTECSTTTEEETFKRPKHSTSPKISKVFVRTDASDTGLYMRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPSCPVKKKVQRSVEDPSVLVTTYEGEHNHGQHHQSAEISVNSSRSESPAASASPSPSPMNNRSAGPIVTLDLVQSKVVDINEQKSSLQKFLVQQMATSLTKDPNFTAALATAISGRILDDTSVGKR 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00152 290 MobiDBLite consensus disorder prediction 198 228 - -
Pumo10g00152 290 Coils Coil 24 51 - -
Pumo10g00152 290 Gene3D WRKY domain 118 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g00152 290 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 24 281 IPR044810 GO:0003700
Pumo10g00152 290 ProSiteProfiles WRKY domain profile. 137 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g00152 290 SMART WRKY_cls 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo10g00152 290 SUPERFAMILY WRKY DNA-binding domain 133 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo10g00152 290 MobiDBLite consensus disorder prediction 190 228 - -
Pumo10g00152 290 FunFam WRKY transcription factor 40 120 197 - -
Pumo10g00152 290 Pfam WRKY DNA -binding domain 137 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00152 Pumo-Chr10 2283024 2284752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00152 6 281 WRKY Transcription Factor Family AT1G80840 47.931 3.11e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo10g00152 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00152 - - gmx:100127373 445.277