Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00151 ATGGAAGAGTGTCACACGGTGTTCGGAAAGTACGAGATGGGGAGGCTTCTGGGCAAGGGCACGTTTGCGAAAGTGTATTACGGGAAGCAAATAAGCATGGGCGAGAGCGTGGCAATCAAAGTAATCAACAAAGAGCAGGTGCGGAAGGAAGGAATGATGGAACAGATCAAACGCGAAATCTCCGTGATGCGTTTGGTGCGACACCCAAACGTGGTGGAACTCAAAGAAGTGATGGCCACAAAGACAAAAATCTTCTTCATCATGGAATACGTGCGTGGCGGCGAACTCTTCGCGAAAATCTCCAGAGGCAAACTCAAAGAAGATCAGGCCCGCAAGTACTTCCAGCAATTAATCAGCGCCGTTGATTACTGCCACAGCAGAGGGGTATCCCACCGTGATCTCAAACCAGAGAATCTACTCCTCGACGATGAGGAAAACCTTAAAATCTCCGACTTCGGTCTCTCCGCGCTTCCGGAGCAGCTTCGTTACGATGGACTCCTCCACACCCAGTGCGGCACCCCTGCCTACGTGGCACCCGAAGTGTTAAGAAAAAAAGGCTACGACGGATCCAAGGCTGATATTTGGTCATGTGGCGTCGTTTTATATGTCTTACTCGCTGGCTTTCTTCCTTTCCAACAAGAGAATCTCATGACCATGTATAACAAAGTTCTCAGAGCCGAGTTTGAATTCCCACCGTGGTTTTCACATGAATCCAAGAGGTTGATATCGAAGATTCTCGTGGCGGACCCGGCGAGGAGGACCACGATTTCCGCCATCACGCGCGAGCCGTGGTTCCGGAAAGGCTTCGTTTCCGCGCCGGACACGTGTCAGTTGGAGAAACAAGAGGCCGTTACGGAGGAAGGTGGTAATAATAATTCCAATTCCAAGGAGCGGAAGTTCTTCAACGCGTTTGAGTTTATTTCTTCGATGTCGTCCGGGTTCGACCTCTCGGGGCTGTTCGAGAGCAAGAGGAAGACGGCGGCAGTTTTCACGTCGAGGTGTTCGGCGGCGGCGATTGTGGCCAAGATTGCGGCGGCGGCGCGGGGGTTGAGTTTCCGCGTGGCGGAGGTGAAGGACTTCAAGATCCGCCTGCAGGGCGCGGCGGAGGGGAGGAAGGGGAGGCTGGTGGTGACGGCGGAGGTGTTCGAGGTGGCGCCGGAGGTCGCCGTCGTGGAGTTTTCGAAGTCCGCCGGCGATACGTTGGAATACGCGAAGTTCTGTGATGAGGACGTGAGGCCCGCGCTGAAGGACATTGTTTGGACGTGGCAAGGGGATGCCACGTGTACTGCTAACGTCCCCGCCTGTCACGGTGAGGAGTGCCAAAAGCAGATTGTTAGTACTATATAA 1347 0.539 MEECHTVFGKYEMGRLLGKGTFAKVYYGKQISMGESVAIKVINKEQVRKEGMMEQIKREISVMRLVRHPNVVELKEVMATKTKIFFIMEYVRGGELFAKISRGKLKEDQARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDDEENLKISDFGLSALPEQLRYDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVVLYVLLAGFLPFQQENLMTMYNKVLRAEFEFPPWFSHESKRLISKILVADPARRTTISAITREPWFRKGFVSAPDTCQLEKQEAVTEEGGNNNSNSKERKFFNAFEFISSMSSGFDLSGLFESKRKTAAVFTSRCSAAAIVAKIAAAARGLSFRVAEVKDFKIRLQGAAEGRKGRLVVTAEVFEVAPEVAVVEFSKSAGDTLEYAKFCDEDVRPALKDIVWTWQGDATCTANVPACHGEECQKQIVSTI 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00151 448 ProSiteProfiles NAF domain profile. 296 321 IPR018451 GO:0007165
Pumo10g00151 448 SMART serkin_6 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00151 448 Gene3D Kinase associated domain 1, KA1 296 421 - -
Pumo10g00151 448 SUPERFAMILY Protein kinase-like (PK-like) 7 278 IPR011009 -
Pumo10g00151 448 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00151 448 ProSiteProfiles Protein kinase domain profile. 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00151 448 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Pumo10g00151 448 CDD CIPK_C 302 416 - -
Pumo10g00151 448 CDD STKc_SnRK3 10 264 - -
Pumo10g00151 448 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Pumo10g00151 448 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Pumo10g00151 448 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 416 - -
Pumo10g00151 448 FunFam Non-specific serine/threonine protein kinase 296 420 - -
Pumo10g00151 448 Gene3D Transferase(Phosphotransferase) domain 1 91 270 - -
Pumo10g00151 448 FunFam Non-specific serine/threonine protein kinase 4 302 - -
Pumo10g00151 448 Pfam NAF domain 300 355 IPR004041 GO:0007165
Pumo10g00151 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00151 Pumo-Chr10 2259388 2263048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00151 2 431 CBL-interacting serine-threonine protein kinases AT5G10930 70.000 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo10g00151 Pkinase 4.5e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00151 - - gmx:100817520 781.941