Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00091 ATGTTCGCTGAAGAGAATGGCCTTAAGGGAGACCCCAGACTTCAAGCCATTTCCCAAGCCATCAGAGTCGTCCCTCACTTCCCCAAACATGGAATAATGTTCCAAGACATAACGACATTGTTGTTGGATCACAAGGCGTTTAAAGACACGGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCCGTTGTTGCCGGAATTGAGGCAAGGGGATTCATGTTTGGTCCTTCAATTGCATTGGGCATTGGTGCGAAGTTTGTTCCCTTACGCAAACCACGGAAGCTGCCAGGTGAAGTAATTTCAGAAAAATATGCTCTAGAATATGGAACTGATTGTCTGGAGTTGCACGTTGGTGCTGTCCAGCCGGGTGAACGGGCCATAGTCATTGATGATTTGGTGGCCACAGGTGGAACTCTGTCAGCTGGAGTAAAACTTCTAGAACGTGTTGGGGCTGAAGTGGTGGAATGTGCTTGTGTGATTGGTGTGCCTGATGTCAAGGGCCAGTGCAGGCGTATTGGAAAGCCACTTTATGTTCTTGTTGAGCCACGTAAAGCAGATAAATGTCAAGCTCAAGCAGATAAATGTTATTGA 597 0.4657 MFAEENGLKGDPRLQAISQAIRVVPHFPKHGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFMFGPSIALGIGAKFVPLRKPRKLPGEVISEKYALEYGTDCLELHVGAVQPGERAIVIDDLVATGGTLSAGVKLLERVGAEVVECACVIGVPDVKGQCRRIGKPLYVLVEPRKADKCQAQADKCY 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00091 198 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Pumo10g00091 198 CDD PRTases_typeI 51 183 IPR000836 -
Pumo10g00091 198 Gene3D - 6 184 IPR029057 -
Pumo10g00091 198 SUPERFAMILY PRTase-like 20 170 IPR029057 -
Pumo10g00091 198 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 185 - -
Pumo10g00091 198 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Pumo10g00091 198 Pfam Phosphoribosyl transferase domain 43 166 IPR000836 -
Pumo10g00091 198 NCBIfam adenine phosphoribosyltransferase 18 180 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00091 Pumo-Chr10 1589527 1594025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00091 11 183 PRT Gene Family AT1G27450 69.364 6.75e-89 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00091 K00759 - gmx:100499904 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00091 10 1589527 1594025 Pumo10g00091 10 1589527 1594025 ECH
Pumo10g00091 10 1589527 1594025 Pumo9g00626 9 10945057 10948623 ECH
Pumo9g00626 9 10945057 10948623 Pumo10g00091 10 1589527 1594025 PCT