Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00090 ATGGCACAAGATATTGCTACTCCACCACTTCCTTTTGATTTTGAACTATTGGTTGGTGATCACCTTAGAACTGTCACAGCCTCATCCAGCTGCACAGATCCATGGATTGAACCTGAAAGGTTGAAACTCAGACACAGGATTGGTCGGGGACCCTTTGGTGATGTTTGGTTAGCAACTCATCATCAATCAACTGAAGATTATGATGAGTATCATGAAGTTGCTGCTAAGATGTTACCTCCAATCAGAGAGGAACATATGAAGACTGCATTAGAGAAATTTTGTGAATTATACTTTCAGTGCCAAGGAGTGGCTAGGGTCTGCTGGCTACTTGGAATTTCAATTTTAAATGGAAGGATATGCATCATTATGAATTTTTACGAGGGTTCAGTTGGTGACAAGATGGCTAGACTCAGAGAGGGAAGGATTTCATTGCCTGATGTTCTGAGGTATGGTATCAATCTGGCTCAAGGTATTCTGGAACTTCACTCAAAAGGGATCCTAGTTCTCAACCTTAAACCATCTAATATGCTTCTCGATGATACTGATCAAGCAATACTGGGAGATATTGGTATTCCAAATCTTCTGTTTGGTTCCTCATTCCTAAGCTCAGATATGGCCAACAGGCTTGGTACTCCAAATTACATGGCTCCAGAACAATGGCAACCAGAAGTCAGAGGCCCTATATCCTTTGAAACAGATTCATGGGGATTTGGGTGCACTATTGTGGAAATGTTGACTGGTAATCAACCTTGGTATGGGTGTCCTGTTGGTGAAATATACCGATCAGTTGTTGAAAAGTATGAAAAACCCCAGATTCCCAGTGGCCTTCCTTCTTCAGTTGAAAATATCCTCAGCGGTTGCTTTGAATATGATTTGAGGAATCGCCCTTCAGTGGTAGATATCCTGGCTGTCTTTAGAAGCTCACTGAATGCAGTAGCCAATGATGGAGGATGGATATATCTTGGAAGTAACAAAACTATAGCAAAATCAAGCAGCACTGGCTACACTCAGTGGTCACTCTCAAAGGATCATCTTCAGGTGGGTGATACAGTGCGTTCTAGAAAGCCTTCCAATTCATGCAATCCTCAAAACATGGAGGTCCCAGAAGGAAATGTTGTTGGTTTAGAACGTAATGCAGATCATGGATTTGTTTTAGTGAGGCTCCATGGTGTTCATGACCCTGTAAGGATTCATGCATCAACTCTTGAACGTGTCACCAATGGTTTGGGAGCTGGGGATTGGGTACGCTTGAGGGAAGAAGATGAGAAGCACTCGCCAGTGGGTATTCTCCATTCTATCAATCGTGATGGCAGAGTGACTGTTGGGTTTATTGGGCTGCAAACTCTTTGGAAGGGTAACTCTTCAGAACTTGAAATGTCAGAATCTTACTGTGTGGGCCAGTTTATTAGGCTGAAAGCGAATGTTTTGAGTCCTCGATTTGAATGGCCACGTAAAAGGGGAGGTGCCTGGGCTACTGGTAAGATTTCTTGGATCCTGCCAAATGGATGTCTAGTTGTCAAGTTTCCAGGCATGTTGAACTTGTTGGATGTACCAAGCACTGTCTTGGCTGATCCCTCCGAGGTTGATGTGGTTAATTTTAAGAATTGTCCAAAGATGATAGAGAAGTATCAACATGTAGAGGATCACCACTGGGCAGTTAGACCTGTTCTAATTGCATTTGGCCTTCTTACTGCTGTGAAACTAGGAATGTCAATTGGAAAGAAAATTGGGAGGAACATGAATGTTAATGCAGTGGAGAATGAAAGTCATTATGCAGATAGCCAGAATGCTAGCAGCCCTACATGGACATCTTCAGTAGCTAACATCCTTTTCAGAGAAGGTGTTAACTTGCCCAATGGTCGGTAG 1866 0.4287 MAQDIATPPLPFDFELLVGDHLRTVTASSSCTDPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLPPIREEHMKTALEKFCELYFQCQGVARVCWLLGISILNGRICIIMNFYEGSVGDKMARLREGRISLPDVLRYGINLAQGILELHSKGILVLNLKPSNMLLDDTDQAILGDIGIPNLLFGSSFLSSDMANRLGTPNYMAPEQWQPEVRGPISFETDSWGFGCTIVEMLTGNQPWYGCPVGEIYRSVVEKYEKPQIPSGLPSSVENILSGCFEYDLRNRPSVVDILAVFRSSLNAVANDGGWIYLGSNKTIAKSSSTGYTQWSLSKDHLQVGDTVRSRKPSNSCNPQNMEVPEGNVVGLERNADHGFVLVRLHGVHDPVRIHASTLERVTNGLGAGDWVRLREEDEKHSPVGILHSINRDGRVTVGFIGLQTLWKGNSSELEMSESYCVGQFIRLKANVLSPRFEWPRKRGGAWATGKISWILPNGCLVVKFPGMLNLLDVPSTVLADPSEVDVVNFKNCPKMIEKYQHVEDHHWAVRPVLIAFGLLTAVKLGMSIGKKIGRNMNVNAVENESHYADSQNASSPTWTSSVANILFREGVNLPNGR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00090 621 CDD STKc_PknB_like 42 307 - -
Pumo10g00090 621 SUPERFAMILY Protein kinase-like (PK-like) 38 303 IPR011009 -
Pumo10g00090 621 PANTHER OS06G0639500 PROTEIN 8 617 - -
Pumo10g00090 621 Gene3D Phosphorylase Kinase; domain 1 21 126 - -
Pumo10g00090 621 ProSiteProfiles Protein kinase domain profile. 41 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00090 621 Pfam Protein tyrosine and serine/threonine kinase 41 302 IPR001245 GO:0004672|GO:0006468
Pumo10g00090 621 Gene3D Transferase(Phosphotransferase) domain 1 127 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00090 Pumo-Chr10 1572030 1576182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00090 32 312 MAP Kinase Kinase Kinase AT2G17700 25.263 1.46e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Pumo10g00090 PK_Tyr_Ser-Thr 3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00090 - - gmx:100780636 1198.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00090 10 1572030 1576182 Pumo10g00090 10 1572030 1576182 ECH
Pumo10g00090 10 1572030 1576182 Pumo9g00629 9 10983178 10988574 ECH
Pumo9g00629 9 10983178 10988574 Pumo10g00090 10 1572030 1576182 PCT