Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00082 ATGGCAAATTCCTCGTGTCAAACGAGGGAACAATTTGCCTTTGGCTTTGGCACCACAATGAATGATACCACCAAGTTTCTACTTCAAATCATCCACGTGGCCACTGCCAGGGTAGTTTGGACCGCTAATAGAGCAGCTCCTGTTGCCAATTCAGACAATTTTGCCTTTGATGAAAAGGGCAACGCCTTCTTACAGAAAGATGGAACCGTGGTTTGGTCCACAAACACAAGTAACAAAGGGGTTTCTTCAATGGACTTGCTTGACACTGGAAATTTGGTTTTGCTTGGGAGTGATAATAGTACAGTGATTTGGCAGAGTTTCAGCCATCCAACAGATACTTTGTTGCCAACTCAGGAGTTCACAGAGGGAATGAAACTCATCAGTGATCCTAGCACGAACAACTTGACCCATGTTCTTGAGATCAAGTCTGGTAGTGTTGTTCTCACTGCAGGTTTTCAAACCCCGCAGACTTATTGGACTATTCACACGGACAACCGCAAAGTCATCAATAAGGACGGTGATGCCGTGGCTTCAGCAAACATTAGTGAAAACTCTTGGAGGTTCTATGACAAAAGCAAATCACTGTTGTGGCAATTCATTTTCTCTACAGATCCAGGCACAAATGCGACTTGGATTGCTGTTTTGGGGAGTGATGGCTTCATCACCTTCACAAACCTCAACAGTGGAGTGTCAAATGCTGATTCTCCAACAAGAATACCCCAAGATTCCTGTGCTACACCAGAACCTTGTGATGCATACACCATATGCACAGGTAACCAAAGGTGTAGTTGCCCTTCTGTTATTCCCAGTTGCAAACGTGGTTTTGACAATCCTTGTGGTGGTGACTCAGAAAAGTCCATTCAGTTGGTTAAAGCTGATGATGGGCTTGATTACTTTGCACTTCAATTCCTTCAACCTTTTTCCAAAACTGATTTGGCCGGTTGCCAATCTTCTTGCCGTGGAAACTGCTCGTGCCTTGCTATGTTCTTCCACAGAAGTTCAGGGAACTGTTTCCTTTTGGACAGTGTAGGAAGCTTTCAGAAACCTGATTCTGATTCTGGCTATGTTTCTTACATTAAGGTCTCGACAGATGGAGGCGCTGGCATGGGTTCTGGGGGCGGTGGAAGTGGCAATAAGCACACCATAGTTATTGTGGTCATTGTCATAATAACCTTGCTTGTCATTTGTGGTCTGGTCTTTGGAGGAGTTAGATACCATAGAAGAAAGCAAAGGTTGCCTGAGTCTCCTAGAGATGGTTCAGTAGAGGACAATTTCTTGGAGAATTTGACTGGTATGCCAATCCGTTACAGCTACAAGGACCTTGAAACTGCCACTAATAACTTCTCTGTGAAGCTTGGACAAGGGGGTTTTGGGTCAGTGTATAAAGGAGTTCTACCAGATGGGACTCAGTTAGCAGTGAAGAAGTTGGAAGGTATTGGACAAGGGAAGAAAGAGTTCAGGGCTGAAGTTAGCATCATTGGAAGCATTCATCACCTTCATTTGGTTAGGCTTAAGGGGTTCTGTGCTGATGGAACTCATAGGCTTCTTGCTTATGAGTACTTGTCTAATGGCTCCTTGGATAAATGGATATTCAAGAAAAACAAAGGTGAGTTTCTGTTGGATTGGGATACTAGGTTCAATATAGCTCTGGGAACAGCAAAAGGACTTGCTTACCTGCATGAAGATTGTGACTCAAAGATAGTTCATTGTGACATCAAGCCAGAAAATGTCCTTCTGGATGACCACTTCATGGCCAAGGTTTCGGATTTTGGGCTGGCTAAGCTCATGAATCGAGAACAAAGCCATGTTTTCACAACACTGAGGGGCACCAGGGGCTATCTTGCACCGGAGTGGATAACAAACTATGCCATATCAGAGAAAAGTGATGTCTATAGCTATGGGATGGTGCTGCTGGAGATCATTGGGGGAAGGAAAAACTATGATCCTCGTGAGTCTTCAGAGAAATCCCATTTCCCAACTTATGCTTTCAAGATGATGGAAGAAGGAAAGCTGAGAGATATTTTTGACTCGGAGTTAAGAATTGATGAGAATGATGATAGGTTTCAATGTGCTATAAAAGTTGCATTGTGGTGCATACAGGAAGACATGTCAATGAGGCCATCTATGACCAGAGTTGTCCAAATGTTGGAGGGTCTTTGTACTGTTCCTAAGCCACCAACCAGTTCTTCATTGGGTTCTCGCCTTTATGCCACTGTGTTCAAATCCTCCAGCGAAGGGGCCACCTCTTCTGGTCCCTCAGACTGTAACAGTGATGCTTATCTCTCCGCTGTTCGCCTTTCAGGGCCTAGATAG 2313 0.4436 MANSSCQTREQFAFGFGTTMNDTTKFLLQIIHVATARVVWTANRAAPVANSDNFAFDEKGNAFLQKDGTVVWSTNTSNKGVSSMDLLDTGNLVLLGSDNSTVIWQSFSHPTDTLLPTQEFTEGMKLISDPSTNNLTHVLEIKSGSVVLTAGFQTPQTYWTIHTDNRKVINKDGDAVASANISENSWRFYDKSKSLLWQFIFSTDPGTNATWIAVLGSDGFITFTNLNSGVSNADSPTRIPQDSCATPEPCDAYTICTGNQRCSCPSVIPSCKRGFDNPCGGDSEKSIQLVKADDGLDYFALQFLQPFSKTDLAGCQSSCRGNCSCLAMFFHRSSGNCFLLDSVGSFQKPDSDSGYVSYIKVSTDGGAGMGSGGGGSGNKHTIVIVVIVIITLLVICGLVFGGVRYHRRKQRLPESPRDGSVEDNFLENLTGMPIRYSYKDLETATNNFSVKLGQGGFGSVYKGVLPDGTQLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVRLKGFCADGTHRLLAYEYLSNGSLDKWIFKKNKGEFLLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDHFMAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPRESSEKSHFPTYAFKMMEEGKLRDIFDSELRIDENDDRFQCAIKVALWCIQEDMSMRPSMTRVVQMLEGLCTVPKPPTSSSLGSRLYATVFKSSSEGATSSGPSDCNSDAYLSAVRLSGPR 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00082 770 CDD STKc_IRAK 452 719 - -
Pumo10g00082 770 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Pumo10g00082 770 ProSiteProfiles Bulb-type lectin domain profile. 1 107 IPR001480 -
Pumo10g00082 770 FunFam Serine/threonine-protein kinase 2 108 - -
Pumo10g00082 770 Gene3D Transferase(Phosphotransferase) domain 1 521 725 - -
Pumo10g00082 770 FunFam serine/threonine-protein kinase PBS1-like 415 520 - -
Pumo10g00082 770 Pfam Protein kinase domain 450 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00082 770 CDD B_lectin 37 110 IPR001480 -
Pumo10g00082 770 Pfam D-mannose binding lectin 38 121 IPR001480 -
Pumo10g00082 770 PIRSF SRK 2 766 IPR024171 GO:0004674
Pumo10g00082 770 FunFam S-receptor-like kinase 5 521 725 - -
Pumo10g00082 770 ProSiteProfiles Protein kinase domain profile. 446 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00082 770 Gene3D - 3 109 IPR036426 -
Pumo10g00082 770 CDD PAN_AP_plant 307 362 - -
Pumo10g00082 770 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 728 - -
Pumo10g00082 770 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 66 230 IPR011047 -
Pumo10g00082 770 SMART blect_4 2 110 IPR001480 -
Pumo10g00082 770 SUPERFAMILY Protein kinase-like (PK-like) 426 717 IPR011009 -
Pumo10g00082 770 Gene3D Phosphorylase Kinase; domain 1 417 520 - -
Pumo10g00082 770 ProSitePatterns Protein kinases ATP-binding region signature. 452 475 IPR017441 GO:0005524
Pumo10g00082 770 SMART serkin_6 446 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo10g00082 770 SUPERFAMILY alpha-D-mannose-specific plant lectins 38 128 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00082 Pumo-Chr10 1490143 1493310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00082 390 728 Receptor kinase-like Gene Family AT5G20050 46.240 2.39e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pumo10g00082 Pkinase 4.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00082 - - gmx:100791158 1422.53