Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00081 ATGCAGCCAGGTACAAAGGAATATCTTCTCATTAAAGAAGAGGTGAGGAAGGTATTGTCCAAGGGAAAGGCTGCCGGCGTGCTTCGACTGGTTTTCCACGATGCTGGAACCTTTGACATGGATGACAGTACAGGTGGTATGAATGGTTCTATAGTCTATGAACTTGAAAGACCTGAAAATGCTGGCCTGAAAAAATCAGTAAAGGTTCTGCAAAAAGCAAAGACTCAGATAGATGCTATCCAACCAGTATCTTGGGCGGACATGATAGCTGTGGCTGGAGCTGAAGCAGTTGAAGTATGTGGAGGTCCATCTATCCAAGTTTCACTGGGTAGACTAGATACACTGGTGCCTGATCCAGAGGGGAGACTTCCTGAGGAATCTCTCGATGCTTCTGGTTTGAAGAAATGTTTCCAGAGTAAAGGCTTTTCAACACAAGAGCTCGTGGCATTGTCTGGAGCCCACACTATCGGAAGTAAAGGTTTTGGAAGCCCAATTTCTTTTGACAATTCATATTATAAGGTTCTTTTGGAGAATCCGTGGACGTCTTCAGGTGGTATGTCGAGTATGATTGGCCTTCCTTCAGATCACGCTCTTGTTGAGGATGATGAATGCTTAAGATGGATTAAAAAATACGCAGACAGTGAGAATCTGTTCTTTGAAGATTTCAAAAATGCGTACGTCAAGCTGGTGAATTCTGGTGTGAGGTGGAATAACTTATAA 720 0.4347 MQPGTKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFDMDDSTGGMNGSIVYELERPENAGLKKSVKVLQKAKTQIDAIQPVSWADMIAVAGAEAVEVCGGPSIQVSLGRLDTLVPDPEGRLPEESLDASGLKKCFQSKGFSTQELVALSGAHTIGSKGFGSPISFDNSYYKVLLENPWTSSGGMSSMIGLPSDHALVEDDECLRWIKKYADSENLFFEDFKNAYVKLVNSGVRWNNL 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00081 239 ProSitePatterns Peroxidases active site signature. 24 35 IPR019794 GO:0004601
Pumo10g00081 239 Gene3D Peroxidase, domain 2 124 226 - -
Pumo10g00081 239 FunFam Adenylate/guanylate cyclase 124 226 - -
Pumo10g00081 239 PRINTS Plant ascorbate peroxidase signature 24 39 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 PRINTS Plant ascorbate peroxidase signature 122 139 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 PRINTS Plant ascorbate peroxidase signature 210 234 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 PRINTS Plant ascorbate peroxidase signature 101 113 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 PRINTS Plant ascorbate peroxidase signature 82 100 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 PRINTS Plant ascorbate peroxidase signature 42 52 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 PRINTS Plant ascorbate peroxidase signature 140 161 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 ProSitePatterns Peroxidases proximal heme-ligand signature. 146 156 IPR019793 -
Pumo10g00081 239 SUPERFAMILY Heme-dependent peroxidases 21 238 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 PRINTS Haem peroxidase superfamily signature 101 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 PRINTS Haem peroxidase superfamily signature 24 38 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 PRINTS Haem peroxidase superfamily signature 83 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 PRINTS Haem peroxidase superfamily signature 146 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 Gene3D - 12 233 - -
Pumo10g00081 239 ProSiteProfiles Plant heme peroxidase family profile. 24 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 Pfam Peroxidase 13 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo10g00081 239 FunFam L-ascorbate peroxidase 14 132 - -
Pumo10g00081 239 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 9 237 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00081 Pumo-Chr10 1475383 1480416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00081 24 237 Peroxidase AT4G16270 30.935 2.10e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00081 K00434 - gmx:100792735 456.832