Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo10g00076 | ATGCCGCATTTGCTGCACGGAAGGCTCGATGTGATCATATATGAGGTCGACACACTATCAACTCCTAACGAGTGCAATCTCAATCTCTGCTGCAAGGGTACAAGTAGAAGCGTGAGGAAGAGATTTCTTTCCCAACTCAAGAGTTGTATGCTCTGTCAATGCCAATGCCAGCCCGAGTTTGTCGAGACGGGCCTCTATGCAACAGTTGATTTAGATAAGGCAAGGGTTGGAAGGACTAGACTGTTAAATCATCAATCCTCCAATCCCACGTGGAACGAGACCTTTCACTTATACTGTGCCCATTTGATCTCTCATGTTATATTCACTGTCAAACAAAAAGATGCAATTGATGCAACTCTAATTGGAAGAGCTTATGTCCCAGTTGAGCAAGTTGTGAATGGCAACATAGTGGATACATGGGTCCAAATATTAGACGAGGATCACAACCCCATACCAAGTGACTCTAAAATCCATGTCAAAATGCAGTTCTCTGATGTTAGGAATGACACAAACTGGTCTCAAGGAATAAGGAGTCCAAGGTTTCAAGGAGTTCCCCACACCTTTTTTAGTCAAAAAAATGGTTGCAAAGTTACTTTGTACCAAGATGCCCATGTTTCAGATGGTTTTGAGCCGTGGATCCTCTTATCAGGAGGAAAACCTTATGAGTATAGAAAATGTTGGGAGGATATTTACAATGCCATTACGAATGCTAGGAACTTTATTTACATAACTGGTTGGTCTGTGTACACTGAAATAACCTTGATCAGGGACCCAATGAAGCCTAGAACAAGAATCACCCTTGGGGAACTGCTCAAGATGAAAGTTGAGGAAGGTGTTAAGGTTCTTATGCTTGTTTGGGATGACAGAACCTCTGTGCCAGATTTCAAGAAAGATGGCTTGATGGCAACTCATGATCAAGAAACTGCTGAATACTTCAAAAACACAAAGGTCAATTGTGTTTTGTGTCCACGGAACCCGGATGAGGGAAGAAGCATAGTGCAAGGTTTTGAAACTTCAACAATGTTCACTCATCACCAAAAGACTATAATTGTTGACAGCCAAGTTGTTGGTGCTGCCATGGGACAACGACAAAAGAGAACAATAGTAAGTTTTGTAGGTGGCATTGATCTTTGTGATGGGAGATATGATACTCAGGAACATCCTCTATTTTCAACTTTGGATACAGTGCACAAAGATGATTTCCATCAGCCAAATTTCCCAGGTGCTTCCATCAAGAAAGGTGGTCCAAGAGAGCCATGGCATGACATTCATTGCAAGTTAGAAGGGTCTGTTGCTTGGGATGTTTTGCTCAATTTTCAACAAAGGTGGGAGAAGCAGGTTGGGAATCAGCTCCTATTCTCTTCAAGCATGCTTGATAAATACTTTGTCCCTCGATCCACTGTGGCAACAACAAATGAAAATGAGACATGGAATGTTCAGTTGTTCAGATCCATTGATGGTGGTGCTGCTTCTGGCTTCCCCCAAGACCCAGAAGAAGCGGCTGAACTAGGCCTTGTTAGTGGGAAAGATAACATCATTGATAGAAGCATTCAAGATGCTTATATTAATGCTATTCGACGTGCCAAAAACTTCATCTACATTGAGAACCAGTACTTCCTAGGGAGTTCATATGGTTGGCAAGCAAATGGTGATATTGTGGTTGCAGACATTGGTGCTTTGCATCTTATACCAAAGGAGCTGTCATTGAAGATTGTTAGCAAGATTGAAGCAGGAGAGAGGTTTTCAGTGTATGTTGTTATACCAATGTGGCCAGAAGGCATACCTGAGAGTGGTTCAGTTCAAGCAATATTAGACTGGCAAAGGAGAACAATGGAGATGATGTATGCTGATATAGCCAAAGCCATTCAGAGAACAGGAATTGAAGCCCACCCAAGGGACTACTTGACCTTTTTCTGCCTTGGAAACCGTGAGGGTAAGAAGGATAGGGAATATACTCCTACTGAGGCACCAGAGCCTGATAGTGATTATGGTAGAGCACAAAAGTCTAGGCGATTCATGATCTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATAATTGGTTCTGCCAACATAAACGAAAGATCAATGGATGGAGCAAGAGACACTGAGATTGCAATGGGTGCATTCCAACCACGTCATATAGCATACAATGGGCAACCCAGAGGACAAATATATGGATTTCGACGTGCACTATGGCATGAGCACCTCGGTGATCATAATGATGCAAGCATCTTTGACAATCCAGAAAGTGTGGACTGCATCAGGCTTGTGAATCATCTTGCTGAAACCAACTGGGACATATACTCTGAAGAAACTTTTGATGAGAATATAGAATTTCACCACCTCATGCGATATCCCATAGAAGTAACCAACAATGGAGCCATAACAACCCTTCCAGGGCTAGAACATTTTCCTGACACCAAGGCTAAGATTTTGGGTTCCAAATCAGATTACCTACCTCCAATTCTCACCACCTAG | 2490 | 0.4233 | MPHLLHGRLDVIIYEVDTLSTPNECNLNLCCKGTSRSVRKRFLSQLKSCMLCQCQCQPEFVETGLYATVDLDKARVGRTRLLNHQSSNPTWNETFHLYCAHLISHVIFTVKQKDAIDATLIGRAYVPVEQVVNGNIVDTWVQILDEDHNPIPSDSKIHVKMQFSDVRNDTNWSQGIRSPRFQGVPHTFFSQKNGCKVTLYQDAHVSDGFEPWILLSGGKPYEYRKCWEDIYNAITNARNFIYITGWSVYTEITLIRDPMKPRTRITLGELLKMKVEEGVKVLMLVWDDRTSVPDFKKDGLMATHDQETAEYFKNTKVNCVLCPRNPDEGRSIVQGFETSTMFTHHQKTIIVDSQVVGAAMGQRQKRTIVSFVGGIDLCDGRYDTQEHPLFSTLDTVHKDDFHQPNFPGASIKKGGPREPWHDIHCKLEGSVAWDVLLNFQQRWEKQVGNQLLFSSSMLDKYFVPRSTVATTNENETWNVQLFRSIDGGAASGFPQDPEEAAELGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWQANGDIVVADIGALHLIPKELSLKIVSKIEAGERFSVYVVIPMWPEGIPESGSVQAILDWQRRTMEMMYADIAKAIQRTGIEAHPRDYLTFFCLGNREGKKDREYTPTEAPEPDSDYGRAQKSRRFMIYVHAKMMIVDDEYIIIGSANINERSMDGARDTEIAMGAFQPRHIAYNGQPRGQIYGFRRALWHEHLGDHNDASIFDNPESVDCIRLVNHLAETNWDIYSEETFDENIEFHHLMRYPIEVTNNGAITTLPGLEHFPDTKAKILGSKSDYLPPILTT | 829 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo10g00076 | 829 | PANTHER | PHOSPHOLIPASE D | 4 | 818 | IPR015679 | - | |
| Pumo10g00076 | 829 | SMART | C2_3c | 46 | 140 | IPR000008 | - | |
| Pumo10g00076 | 829 | FunFam | Phospholipase D delta | 217 | 460 | - | - | |
| Pumo10g00076 | 829 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 63 | 166 | IPR035892 | - | |
| Pumo10g00076 | 829 | SUPERFAMILY | Phospholipase D/nuclease | 169 | 453 | - | - | |
| Pumo10g00076 | 829 | SMART | pld_4 | 672 | 699 | IPR001736 | GO:0003824 | |
| Pumo10g00076 | 829 | SMART | pld_4 | 340 | 381 | IPR001736 | GO:0003824 | |
| Pumo10g00076 | 829 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 672 | 699 | IPR001736 | GO:0003824 | |
| Pumo10g00076 | 829 | ProSiteProfiles | Phospholipase D phosphodiesterase active site profile. | 340 | 381 | IPR001736 | GO:0003824 | |
| Pumo10g00076 | 829 | PIRSF | PLD_plant | 1 | 829 | IPR011402 | GO:0004630|GO:0005509|GO:0016020|GO:0046470 |
Showing 1 to 10 of 21 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo10g00076 | K01115 | - | gmx:100791688 | 1568.9 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pumo10g00076 | 10 | 1428330 | 1432683 | Pumo7g00157 | 7 | 1817261 | 1821748 | ECH | |
| Pumo10g00076 | 10 | 1428330 | 1432683 | Pumo4g04324 | 4 | 84258509 | 84264006 | ECH | |
| Pumo10g00076 | 10 | 1428330 | 1432683 | Pumo10g00075 | 10 | 1418252 | 1422770 | ECH | |
| Pumo10g00076 | 10 | 1428330 | 1432683 | Pumo10g00076 | 10 | 1428330 | 1432683 | ECH |
Showing 1 to 4 of 4 entries