Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00063 ATGGCTGTGGCTTTTCAGTGTTTATCGTGTGCTCGGAGTGAGCCTTTCCTCACAGCAAGGCAATCCCTCACACTTCCTTTCCAACGCAAACCACATTTTTGCTCCCTCCCTCTTTCCTTTCGCGCTCGTAACCTCTCTTCTTCAATTGTCGCTGCTTCTTCCAAAAAGAAGAAAAACAAGAAAAAATTGTCTCGTGATCATGTTACTGAGGGCGACGAGGAGGACGTGGACGCGTTTGAGCTGCTGTTCAAGCGACTCGAAGAAGATCTCAAACGCGGTGATTTGTCAGAAGATGATGGTGAAGATGAGATAAGTGAAGAAGACATGGCATTGCTTGAGCGTGAGTTGGAAAATGCTTTGGGGGACTTTGATACTGAATTGTTGAACTCGGATGTAATTGAGGTGGAAACTCGTAGTGATCCAGAAGATGATGATGATGATGGTGATGATGTTGACGATGTTGACGATGATGATGATGGTGGAGATGAAAGGTCACTGAACCTTAGGAATTGGCAGATGAAGAAATTGGCTAGAGCTTTAAAAGCTGGCCGCCGCAAAACTAGTATAAAAAATCTTGCTGCGGATCTTTGTCTTGATAGGGCTCTTGTTCTTCAATTGCTTCGTGACCCTCCTCCAAATCTTTTAATGATGAGTCTATCAATACCCGATGAACCCACAACGACTGTAGTATCACTTGAAACTAAGCCTAGTGAGATTCTTCATAAAGAAACAAGTATTGATCATGCAGAATTTGAACCCAAGGCTAAAGTACCTGTTCATACCTTGCAACGTAATTGGTATGCTCAAAAGCGATTGAAAAAGGCCCATGTTGACACTTTGGAGAGAGTTTATAGGAGATCAAAACGACCCACTAATGCAATGATCAGTAGTATCGTACATGTAACAAACATTCCTCGAAAAAAAGTTGTTAAGTGGTTTGAAGACAAACGTGCTGAGGAGGGAGTTCCAGATCGCCGTCTTCCTTACCAGCGCTCTCTTCCTGAAACTGCTTGA 1014 0.4329 MAVAFQCLSCARSEPFLTARQSLTLPFQRKPHFCSLPLSFRARNLSSSIVAASSKKKKNKKKLSRDHVTEGDEEDVDAFELLFKRLEEDLKRGDLSEDDGEDEISEEDMALLERELENALGDFDTELLNSDVIEVETRSDPEDDDDDGDDVDDVDDDDDGGDERSLNLRNWQMKKLARALKAGRRKTSIKNLAADLCLDRALVLQLLRDPPPNLLMMSLSIPDEPTTTVVSLETKPSEILHKETSIDHAEFEPKAKVPVHTLQRNWYAQKRLKKAHVDTLERVYRRSKRPTNAMISSIVHVTNIPRKKVVKWFEDKRAEEGVPDRRLPYQRSLPETA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00063 337 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 5 330 - -
Pumo10g00063 337 Gene3D - 265 324 - -
Pumo10g00063 337 MobiDBLite consensus disorder prediction 137 161 - -
Pumo10g00063 337 SMART HOX_1 269 327 IPR001356 GO:0003677
Pumo10g00063 337 CDD homeodomain 269 318 IPR001356 GO:0003677
Pumo10g00063 337 ProSiteProfiles 'Homeobox' domain profile. 263 323 IPR001356 GO:0003677
Pumo10g00063 337 Pfam Homeodomain 271 319 IPR001356 GO:0003677
Pumo10g00063 337 MobiDBLite consensus disorder prediction 135 166 - -
Pumo10g00063 337 SUPERFAMILY Homeodomain-like 265 326 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pumo10g00063 Homeodomain 9.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00063 - - gmx:100798718 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00063 10 1274997 1278841 Pumo10g00063 10 1274997 1278841 ECH