Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00059 ATGTCAGTATCATCAGTATCTCGTGTTTTTGACACCATTAGTGAATGTGTCTCCTTGATTCATTCAGACTCAATTGAAGTTCAGGAAAAAGCTCTTCAAACATTGGCTTCCATAACCAAGGTCAGTCCCCAAAACAGAACCATGCTAGCTCAAACAGATGGAGCCATCCCAACATTAGCCACACTAACAAACTCTCCCTCCCCTATCATCCAGACACTTTCCTTGTTGACCCTCTTCAATCTATCCCTCAATCCTGATCTGAAGCAATCTCTTGCTGACATGGAAACCATTTACTACCTCAATTCCCTCATCACCTCAACAAGTTCCCTTGATTCCTCCAAATTGGCCTCCTCATTGATTTGCAGCTTGGCCATGCATGACAAAAACAAGGCCAAATTTGGGGTGGCAGGCACAGTTCAGTTGCTAGTGAAAGGCATTGAAGGCTCTCATGATGCAAACCACCTTTTGAGTTCTCTGGCCGAGCTTGTTCACTTTCATGGAAACTGCACTTTGGCCGTGCGAGCTGGGGCAGTGCCGGTGCTGCTTCGGGTTGCGAAGGGCACTGATAATAATGAGGACTTGGCTGGAACTTCTCTTGTTGTTCTTAGTCTCCTCGCGAGGTTTGATGAAGGGTTGAATGGTTTGAAGAGAACGAATGAGATTGTTAAGGTGATGTTGAGTGTGATGAAAGGGAGGTCCTTGTTGAGTAAGGAGGGTGCAGCTGATATCCTTATTCGCCTTTTTGATGACAGTGAAGACTGTGTCATGGAGGCTTTTATGTTGCCGGAATTTTCAACCGTGTTGGCTGATCTTTGTGTGAGGGGTTCTGTGAGAGTTCGAGACAAGGCGGATTTGTTGATGAGGAAGATGGCAAAGGTGAGCTTAGACTCTGATATGGAAGTATGCTCCCTGCATGTTGTGTTCATGGATAACAAATATGTTTCTGTAATCTTACGCTAA 960 0.4521 MSVSSVSRVFDTISECVSLIHSDSIEVQEKALQTLASITKVSPQNRTMLAQTDGAIPTLATLTNSPSPIIQTLSLLTLFNLSLNPDLKQSLADMETIYYLNSLITSTSSLDSSKLASSLICSLAMHDKNKAKFGVAGTVQLLVKGIEGSHDANHLLSSLAELVHFHGNCTLAVRAGAVPVLLRVAKGTDNNEDLAGTSLVVLSLLARFDEGLNGLKRTNEIVKVMLSVMKGRSLLSKEGAADILIRLFDDSEDCVMEAFMLPEFSTVLADLCVRGSVRVRDKADLLMRKMAKVSLDSDMEVCSLHVVFMDNKYVSVILR 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00059 319 SMART arm_5 165 207 IPR000225 GO:0005515
Pumo10g00059 319 SMART arm_5 42 83 IPR000225 GO:0005515
Pumo10g00059 319 PANTHER U BOX DOMAIN-CONTAINING 17 290 - -
Pumo10g00059 319 Gene3D - 8 292 IPR011989 -
Pumo10g00059 319 SUPERFAMILY ARM repeat 12 290 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00059 26 294 U-box Gene Family AT3G46510 26.642 5.05e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00059 - - gmx:121174819 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00059 10 1215494 1216682 Pumo10g00059 10 1215494 1216682 ECH