Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00057 ATGACAAAGAAGAAGAATCCCCTGGTGTTTATGGATGTGTCCATCGATGGGGATCCTGTTGAAAGGATGGGTTTTGAGCTTTTCTATGATGTTGCTCCCAAGACTGCAGAAAACTTTCGTGCATTATGTACAGGAGAAAAAGGTATCAGTCCAAATACTGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCAGATCATAAAAGGTTCCATTGTGCAGGGTGGAGATTTTGTCAATCGAAATGGGACCGCTGGAGAAAGCATATATGGTTCAAAGTTCCCAGATGAGTCACCTAGGCTAAAGCATGATGCTACTGGCCTTTTATCAATGGCAATTGCAGACCGTGACACACTTGGTTCTCATTTTATAATCACTTTGAAAGCTGATCATCATCTTGATAGGAAGCATGTAGTCTTTGGGAAGCTTGTGCAAGGGCATAATGTATTGAAGAAAATTGAAGAAGTGGGTGATGAAGAAGGGCATCCAACTGTAACTGTTAAAATCATTAATTGTGGTGAATATAGTGAGGATGGAAAGAAGGTAAATAAATCAAAAATGGGAAAGAATAAAAAATCTTCAAAAGACAGAAGGAAAAGGAGAAAATACTACTCATCTGAATCGGGGAGCTCTTCAGATTCTGATACGGAATCTTCGGAAACTGATAGTGATTCTGAGTCAGATATGTCCTCATCATCTTACACGAGTTCTTCTAGTGATGACAGGCGAAGGAAGAGAAAGAGATCTAAGAAAGATAAATATAGACGGGGAAAAAGAAGAGATAAACGCCGTGACAAGAGGCGAAGGAGAAGGGATAAGAGATCAAAGCGTAAATCAAAAAGGGAATCGGGCAGTGACTCAGATAGTGAGAGTAACAGTGGCAGTAGCTCTGAAGGTGAAGGTATTGGTGCTCAACATAAGGGGCTGAAGCGTAAAGATCATTCTCAGAAAAATGCTGAAATAAAGTCTCCCTTAGGTGTGGAGAAAGATTTGTCTCCTGCGCATCATGAAAAGGAGGAAGTGGGTATGCTAGAGAACGAGGAAAAATTTTCAAAGGAAAACGGAGAGCGACGTAGCAATGGCATTGGAGGAGCTGACTACGGATCTGACAGAAGTGAAGAGAGGCAGCCTGACGTTATGGATGAACATTCAGGCAAAACTAGGAGTCGAAGCGTGAGTCCTAAGCGATCCATGAGTAAGAGTATGAGTATTAGTCCCAGGAGGAATGCGAGCAAGAGCCCAAGTGTTACTCCAAAAAGGAGATTGAGCAAAAGTCCAAGTGTTAGAAGCCCTCCTCCATCACAGAGGAGTTTGAGCAGAAGTCCCTGCTAG 1332 0.4227 MTKKKNPLVFMDVSIDGDPVERMGFELFYDVAPKTAENFRALCTGEKGISPNTGKSLHYKGSFFHQIIKGSIVQGGDFVNRNGTAGESIYGSKFPDESPRLKHDATGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGKLVQGHNVLKKIEEVGDEEGHPTVTVKIINCGEYSEDGKKVNKSKMGKNKKSSKDRRKRRKYYSSESGSSSDSDTESSETDSDSESDMSSSSYTSSSSDDRRRKRKRSKKDKYRRGKRRDKRRDKRRRRRDKRSKRKSKRESGSDSDSESNSGSSSEGEGIGAQHKGLKRKDHSQKNAEIKSPLGVEKDLSPAHHEKEEVGMLENEEKFSKENGERRSNGIGGADYGSDRSEERQPDVMDEHSGKTRSRSVSPKRSMSKSMSISPRRNASKSPSVTPKRRLSKSPSVRSPPPSQRSLSRSPC 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00057 443 Gene3D - 1 175 IPR029000 -
Pumo10g00057 443 MobiDBLite consensus disorder prediction 178 443 - -
Pumo10g00057 443 SUPERFAMILY Cyclophilin-like 4 176 IPR029000 -
Pumo10g00057 443 MobiDBLite consensus disorder prediction 329 356 - -
Pumo10g00057 443 MobiDBLite consensus disorder prediction 185 199 - -
Pumo10g00057 443 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Pumo10g00057 443 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Pumo10g00057 443 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Pumo10g00057 443 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Pumo10g00057 443 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Pumo10g00057 443 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Pumo10g00057 443 MobiDBLite consensus disorder prediction 243 278 - -
Pumo10g00057 443 MobiDBLite consensus disorder prediction 368 389 - -
Pumo10g00057 443 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Pumo10g00057 443 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Pumo10g00057 443 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 173 IPR002130 GO:0000413|GO:0003755
Pumo10g00057 443 MobiDBLite consensus disorder prediction 391 443 - -
Pumo10g00057 443 MobiDBLite consensus disorder prediction 304 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00057 Pumo-Chr10 1208730 1212624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00057 23 170 U-box Gene Family AT5G67530 39.333 3.44e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00057 K09566 - gmx:100800303 369.777