Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00051 ATGGGAGCACCATTTAAGGGAATAATTCAAGATGTCAAGGGAAGAGCTCAATGCTATAAACAAGATTGGATTTGTGCAATCTGTTCTGGCGTTGGCATATTGGCTCCAACTTTCTACATATTCTTTGCTTCTGCTCTTCCTGTCATTGCTTTTGGAGAGCAACTTAATAGGGATACAGATGGAACCTTGAGCACAGTGGAAACATTGGCATCTACTGCTATTTGTGGAGTTATTCACTCAATATTTGGTGGCCAACCTTTGTTGATTTTGGGAGTTGCTGAACCCACTGTCATAATGTACACTTACCTGTACAGTTTTTGCCAAAAAACGCCTGAACTGGGTGGCAAGCTGTTTCTGCCTTGGGCTGGTTGGGTTTGTGTTTGGACGGGATTCTTTTTGATTCTGCTTGCAATTTTTAATGCTTGCACAATTATTACAAGGTTTACAAGAATTGCAGGGGAGTTATTTGGCATGCTCATAACTGTCCTTTTCTTTCAAGAGGCTATAAAGGGATTGATAGGTGAGTTCAACACGCCCAAGAATGAAAATCCTTCCTCAGTGGAATTTCAATTCCAGTGGCGGTATACAAATGGATTACTTGCAATCATTTTCTGTTTTGGACTACTTGTCACTGCCCTTAAAAGCAGAAGAGCAAGAACGTGGCGATATGGAACAGGGTGGCTACGAGGATTTATAGCAGAGTATGGGGTTCCGTTGATGGTGGTGTTATGGACTGCACTATCTTACGGTATACCAGGCAAAGTTCCAGATGGTGTTCCTAGAAGGCTCATTGCTCCCCTTCCCTGGGATCCTGCATCTCTCTATCACTGGACAGTAGTGAAGGACATGGCGAAGGTACCCGTGGTTTATATATTTGGGGCAATTATTCCAGCTCTGATGATAGCAGGCTTATACTTTTTCGATCACAGCGTAGCTTCGCAGATGGCACAACAGAAAGAATTTAACCTTCAAAAACCATCTGCCTACCACTATGATGTTTTGCTGCTTGGAATAATGACTCTGATTTGCGGGATCCTTGGCCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCCCCCATGCATACAAAGAGTTTAGCAGTTCTTAGGAGGCGGTTGATCCGAAAGAAGGTGGTGAAGAGCGCCAAGGAATGTATTAAGCAACGAAGGACCAACTCTGAATTATATGGAAAGATGCAAGCTGTGATTGTAGAAATGGATACAGACCCTACGGTTAAAGAATTGGAGACTTTGAAGGAAGCTGTAATGAATCCTGATAACAAGGATGGTGCAAAGGAAGAATTTGATCCCGAGAAACACATAGATGAATATCTACCAGTGCGGGTTAATGAGCAAAGAATGACCAACTTATTGCAGTCTCTCCTGGTTGGCATATCAATCTTAGCCATGTCAGTTATCAAAAGGATACCAACCTCGGTTCTATGGGGATATTTTGCTTACATGGCAATTGATAGTCTTCCAGGAAATCAGTTCTGGGAAAGGATATTGCTTCTCTTCGTCACCCCAAGCCGGCGTTACAAAATTTTGGAAGGCTCTCATGCCTCTTTTGTGGAGACAGTACCATACAAGACCATAGCTGCATTTACAGCCTTACAGTTAGCATATTTTCTGTTATGTTTCGGGGTGACTTGGATACCTATAGGTGGAATATTGTTCCCGGTACCATTCTTCCTTCTTATAATTATAAGAGAACACTTGCTTCCAAAGATATTCAAGCCTAGCCATCTTCAAGAACTAGATGCTTCTGGGTATGAGGAAATTGCTGGTGCTCCACATGGTTCACTGAGGGTACGAATTATAATTCATTTCTTGTTATGGAAGACCATTTGTTTGTATATTCCAAGCTTTTCAACTTATGACCTGAATATGTTTAATCAGGATAATGAGCCAGATACTGATACTGATGGAAGCTCAGAAGACTTCTACGATGCAGAGATATTGGATGAGATGACAACCAACAGGGGAGAGTTGAAACTTAGAGCTGTAAGCAGCTTCAATGACAGAAACCACAGCTTCAATGACCGAAACCACAGCTTCAATGATAGAAACCACAGCTTCAGTGATAGAAACCACAGCTTCAGTGAAGACAGGCACACTCAGGTTTGTCCTGGAGATGCTGTCTGA 2142 0.4244 MGAPFKGIIQDVKGRAQCYKQDWICAICSGVGILAPTFYIFFASALPVIAFGEQLNRDTDGTLSTVETLASTAICGVIHSIFGGQPLLILGVAEPTVIMYTYLYSFCQKTPELGGKLFLPWAGWVCVWTGFFLILLAIFNACTIITRFTRIAGELFGMLITVLFFQEAIKGLIGEFNTPKNENPSSVEFQFQWRYTNGLLAIIFCFGLLVTALKSRRARTWRYGTGWLRGFIAEYGVPLMVVLWTALSYGIPGKVPDGVPRRLIAPLPWDPASLYHWTVVKDMAKVPVVYIFGAIIPALMIAGLYFFDHSVASQMAQQKEFNLQKPSAYHYDVLLLGIMTLICGILGLPPSNGVLPQSPMHTKSLAVLRRRLIRKKVVKSAKECIKQRRTNSELYGKMQAVIVEMDTDPTVKELETLKEAVMNPDNKDGAKEEFDPEKHIDEYLPVRVNEQRMTNLLQSLLVGISILAMSVIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRRYKILEGSHASFVETVPYKTIAAFTALQLAYFLLCFGVTWIPIGGILFPVPFFLLIIIREHLLPKIFKPSHLQELDASGYEEIAGAPHGSLRVRIIIHFLLWKTICLYIPSFSTYDLNMFNQDNEPDTDTDGSSEDFYDAEILDEMTTNRGELKLRAVSSFNDRNHSFNDRNHSFNDRNHSFSDRNHSFSEDRHTQVCPGDAV 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00051 713 PANTHER ANION EXCHANGE PROTEIN 2 594 IPR003020 GO:0005452|GO:0006820|GO:0016020
Pumo10g00051 713 Pfam HCO3- transporter family 193 372 IPR011531 GO:0006820|GO:0016020
Pumo10g00051 713 Pfam HCO3- transporter family 446 536 IPR011531 GO:0006820|GO:0016020
Pumo10g00051 713 Pfam HCO3- transporter family 4 179 IPR011531 GO:0006820|GO:0016020
Pumo10g00051 713 Gene3D Helical hairpin bin 15 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00051 Pumo-Chr10 1108895 1114914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00051 4 682 Antiporters AT4G32510 64.483 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00051 K24194 - gmx:100787412 1242.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00051 10 1108895 1114914 Pumo10g00051 10 1108895 1114914 ECH
Pumo10g00051 10 1108895 1114914 Pumo9g00661 9 12422145 12426228 ECH
Pumo9g00661 9 12422145 12426228 Pumo10g00051 10 1108895 1114914 PCT