Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00044 ATGGAGGAAATTGAAGGGGTGAATTGTTGCAGTGAAAGTGAAAGTAGGAGCTCTAGTGAGACTCGACCTCCCAATCCCAAGCCACCTTCATATCGCCAATGCAAACTTGTTCGCCACGCTTCTCTCATGAAAACAAAGTTGTCTGATGTATCTGCTGAAGATTGTCAGTCTGATTTCTTTCCAATGCTTCGTTCTGGAGCTTGCGCTGATATTGGATTCCGGTCAAGTATGGAAGACGTATATGTTTGTGTTGACAATTTTATGGAGGATTATGGACTCAAGAACCATATAGATGGACCCAGTGCTTTCTATGGGGTATTTGATGGACATGGTGGAAAGCATGCTGCTGACTTTGCTTGCCATCATCTGCCAAAGTTCATTGTTGATGACAAAGATTTCCCTAGAGATATTGAAAGGATAGTTGCTTCAGCATTTCTGCAAACAGACAATGCCTTTGCAGAAGCTTGCTCTCTGGATGCTGCACTTGCATCTGGCACCACTGCATTAGCAACTCTTGTTATAGGAAGGTTGCTGGTGGTGGCAAATGCTGGAGATTGTCGAGCTGTGCTGTGCCGTCGTGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCGGGTTGCAATAAAGAAAAGAAGCGTATCGAGGCATCTGGGGGGTATGTCAATGATGGATATCTCAATGGACAACTCAATGTTGCTCGTGCACTTGGTGACTGGCACATGGAAGGAATGAAGAGCAAAGACGGTGGACCACTGACTGCAGAACCTGAACTTATGACTACAAAACTGACCGCTGAGGACGAATTTCTCATCATAGGTTGTGATGGGATTTGGGATGTATTCAGGAGCCAAAATGCAGTGGATTTTGCTCGGCGCAGGCTTCAGGAGCATAACGACCCTGCCATGTGTAGCAAGGATCTGGTTGATGAGGCATTAAAGAGAAAAAGTGGAGACAATTTGGCTGCAGTTGTGGTTTGCTTCCAGCAGCAACCTCCTCCTAACTTGGTGCCACCGCGCTCTAGAGTGCAACGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAAAGCTTCCTGGACAGCTTGGGTAATTGA 1092 0.4597 MEEIEGVNCCSESESRSSSETRPPNPKPPSYRQCKLVRHASLMKTKLSDVSAEDCQSDFFPMLRSGACADIGFRSSMEDVYVCVDNFMEDYGLKNHIDGPSAFYGVFDGHGGKHAADFACHHLPKFIVDDKDFPRDIERIVASAFLQTDNAFAEACSLDAALASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPGCNKEKKRIEASGGYVNDGYLNGQLNVARALGDWHMEGMKSKDGGPLTAEPELMTTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAMCSKDLVDEALKRKSGDNLAAVVVCFQQQPPPNLVPPRSRVQRSFSAEGLKELQSFLDSLGN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00044 363 ProSiteProfiles PPM-type phosphatase domain profile. 64 327 IPR001932 -
Pumo10g00044 363 MobiDBLite consensus disorder prediction 1 31 - -
Pumo10g00044 363 SMART PP2C_4 54 325 IPR001932 -
Pumo10g00044 363 FunFam Probable protein phosphatase 2C 22 48 330 - -
Pumo10g00044 363 Pfam Protein phosphatase 2C 66 319 IPR001932 -
Pumo10g00044 363 Gene3D - 42 331 IPR036457 -
Pumo10g00044 363 ProSitePatterns PPM-type phosphatase domain signature. 103 111 IPR000222 GO:0043169
Pumo10g00044 363 PANTHER PROTEIN PHOSPHATASE 2C 32 325 IPR015655 GO:0004722|GO:0006470
Pumo10g00044 363 CDD PP2Cc 64 327 IPR001932 -
Pumo10g00044 363 SUPERFAMILY PP2C-like 59 329 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00044 Pumo-Chr10 1052729 1055738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00044 1 363 PP2C-type Phosphatase Gene Family AT2G25620 67.342 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00044 K14803 - gmx:100815725 688.723