Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g00013 ATGCTCAGGGAGCCTCTCAACAAGAAGCTACGTTTTTGTTATCAGAATAAGCTAAAGGCTTGCCTTGTGCATATATATGTGCACCAAGTATACACAGCAACGTTGATAACAAGAAGTAGTGTTGATCTCTCTCGAGGAAGCCATTTTGTCATGGTGGCTCTAAGAATGTCCATGTCATCTCTAGTTAGAAGACGCTCAATTGACGAAATATGGAACTCGGCCTCGGTTTCCAATAGCCTTTTTCCAGCATTTGGCACCACCATCTTTGATATTGAAGGTTACTCGAAGTCGAACCTAAGAAAATATGTCATTGCTCCCTATGACCGTAGATATCAATTGTGGCAAACGTTCCTAGTGGCATTGGTAGTGTACTCTGCATGGGCATCTCCATTCGAGCTAGCTTTCAGAGAACTGTTAGTTGGGTCGCTGTTGCCCGTTGATCTCCTTGTCGATGCCTTCTTTGCGGTTGATATAATCCTTACTTTCTTTGTGGCTTACTTAGATACATCAACTTATCTCCTCGTTGACCACCATAAAAAGATTGCTCTCAGGTACGTCAAAAAGCTACACTTCACCATGGATCTAGCCTCCACTGTGCCATTTGAGCAGATATGCCAAATCCTGACGGGCAAACCAACCAAAAGCGAGGTCTTTGGTTTCCTAATTATGCTTAGACTATGGCGATTGAGGCGTGTTAGCGAACTCTTCGCAAGGCTAGAAAAAGACATACGAATTAACTACTCAGCAACAAGATTTTGCAAACTTATATGCGTTACGCTATTTGCAGTGCACTTCGCAGGCTGCATGTATTTTTGGTTGGCCATCCAGCACAAAACACCCCAAAACACATGGATCGGTAACAAAACAGAGGATTTTAATGATTTGAGCGTCGGGTTGGGTTACACTTATTCCATGTACTGGTCTGTTGCAACCCTTACCACTGTTGGCTATGGAGATTTTTATGCAGTGAATTTAACGGAGAAGCTTTTCAGTACTCTATACATGCTGTTTAACATCGGCCTCACTGCATATATAATCGGAAACATGACAAATCTGTTGGTTCATAGCTCTGTCCGAAACTTTGCCATGAGGGATGCCTTCAACAAAATATTACAATATGCAAACAAAAATAGGCTCCCGGAAGGCTTAAAGGAGCAAATGTTGGCACACATGCAATTGAAGTTTAAGACTGCAGAGTTACAGCAAGAAGTGCTACAAGATCTACCTAAAACAATAAGATCCAGAATAGCTCAGCATCTTTTCCAAAACATAGTTGAAACAGCATATTTATTTAAAGGAGTCTCTGATGATTTTATCACCCAGCTGGTGTCAGAAACGAAGGCAGAATACTACCCATCTAAGGTTGACATTATCTTGCAAAATGAGATGCCAACATATTTCTACATTTTGGTATCCGGATCACTGGATGTGTTGAAATACAAGAATGGGTCCGAACAGTTTTTGTTCAAACTTGAATCTGGAGGCATGGCAGGAGAAATAGGTGTGATGTTTAATAGTCCACAACCTTTTACAGTGAGAAGTAGAGGATTCTCCCAGGTCATACGAATCAATCATCACCATTTCAAGCAGATGGTGCAACCATTTAGTGACGATGGGAAGGCAATCTTCTACAACTTTATTCAGTATTTGAGGGGCTTCAAAGGCAAGGTGCTAGAAGAAATATCATATGTAACAGAATTGCTGGGTGACCTTCATGATGAGCATCTAACGCAAAATGGGGGTACACTCGATGAAGTTTCAAGATATCAAGAAGATCCATATAAAGAAGGAAGAACAGGAAATTCCAAAACACAGTCAAGCCCAGTCCCCATTAGAGTTACAATCCACGGACACCATCCCGATGAAAACAAAACGGGAAACGGAACAACACCAAAGCTCATCCTTCTCCCAAATTCGGTAGAAGATCTTTTTGAAGTTGCAGGTATGAGTGACTACATTCAACATGCATGCATGCATCCAAAAGATTCTCAGTTGTTTCATGATTGA 2007 0.4141 MLREPLNKKLRFCYQNKLKACLVHIYVHQVYTATLITRSSVDLSRGSHFVMVALRMSMSSLVRRRSIDEIWNSASVSNSLFPAFGTTIFDIEGYSKSNLRKYVIAPYDRRYQLWQTFLVALVVYSAWASPFELAFRELLVGSLLPVDLLVDAFFAVDIILTFFVAYLDTSTYLLVDHHKKIALRYVKKLHFTMDLASTVPFEQICQILTGKPTKSEVFGFLIMLRLWRLRRVSELFARLEKDIRINYSATRFCKLICVTLFAVHFAGCMYFWLAIQHKTPQNTWIGNKTEDFNDLSVGLGYTYSMYWSVATLTTVGYGDFYAVNLTEKLFSTLYMLFNIGLTAYIIGNMTNLLVHSSVRNFAMRDAFNKILQYANKNRLPEGLKEQMLAHMQLKFKTAELQQEVLQDLPKTIRSRIAQHLFQNIVETAYLFKGVSDDFITQLVSETKAEYYPSKVDIILQNEMPTYFYILVSGSLDVLKYKNGSEQFLFKLESGGMAGEIGVMFNSPQPFTVRSRGFSQVIRINHHHFKQMVQPFSDDGKAIFYNFIQYLRGFKGKVLEEISYVTELLGDLHDEHLTQNGGTLDEVSRYQEDPYKEGRTGNSKTQSSPVPIRVTIHGHHPDENKTGNGTTPKLILLPNSVEDLFEVAGMSDYIQHACMHPKDSQLFHD 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g00013 668 MobiDBLite consensus disorder prediction 593 632 - -
Pumo10g00013 668 Gene3D - 112 355 - -
Pumo10g00013 668 FunFam Potassium channel KAT3 113 355 - -
Pumo10g00013 668 SMART cnmp_10 430 547 IPR000595 -
Pumo10g00013 668 SUPERFAMILY Voltage-gated potassium channels 106 354 - -
Pumo10g00013 668 ProSiteProfiles cAMP/cGMP binding motif profile. 430 549 IPR000595 -
Pumo10g00013 668 PANTHER POTASSIUM CHANNEL AKT1 73 570 IPR045319 GO:0005249|GO:0006813
Pumo10g00013 668 PRINTS EAG/ELK/ERG potassium channel family signature 327 338 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo10g00013 668 PRINTS EAG/ELK/ERG potassium channel family signature 301 318 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo10g00013 668 PRINTS EAG/ELK/ERG potassium channel family signature 147 157 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo10g00013 668 PRINTS EAG/ELK/ERG potassium channel family signature 158 167 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo10g00013 668 PRINTS EAG/ELK/ERG potassium channel family signature 345 354 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pumo10g00013 668 CDD CAP_ED 430 542 IPR000595 -
Pumo10g00013 668 Pfam Cyclic nucleotide-binding domain 451 533 IPR000595 -
Pumo10g00013 668 Pfam Ion transport protein 112 353 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pumo10g00013 668 FunFam Potassium channel KAT2 418 554 - -
Pumo10g00013 668 Gene3D Jelly Rolls 397 551 IPR014710 -
Pumo10g00013 668 SUPERFAMILY cAMP-binding domain-like 360 551 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g00013 Pumo-Chr10 658855 667582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo10g00013 63 647 Ion Channels AT4G32650 55.184 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g00013 K21867 - gmx:100794620 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g00013 10 658855 667582 Pumo10g00013 10 658855 667582 ECH