Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo109g00012 ATGGGGTCATCCTCTTGGACACCAACGCAAGACAAAATATTTGAACATGCCCTAGCTATATATGATAGGGAAACACCGGATAGGTGGCAGAATATTGCCAAAATGGTGGGAAAATCTATAGAGGAGGTTAAAACGCACTACGAGATCCTCAAAGAAGATATCAAGCGCATTGAGCAAGGTCAAGTGCCATTTCCTTATGCAGTCTCATGTCACAATGAAACCAGCACTTACATGAAAAAACCATGA 246 0.4187 MGSSSWTPTQDKIFEHALAIYDRETPDRWQNIAKMVGKSIEEVKTHYEILKEDIKRIEQGQVPFPYAVSCHNETSTYMKKP 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo109g00012 81 SMART sant 2 53 IPR001005 -
Pumo109g00012 81 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 72 IPR044636 GO:0003700
Pumo109g00012 81 Gene3D - 2 64 - -
Pumo109g00012 81 CDD SANT 5 51 IPR001005 -
Pumo109g00012 81 Pfam Myb-like DNA-binding domain 4 47 IPR001005 -
Pumo109g00012 81 FunFam Transcription factor SRM1 1 64 - -
Pumo109g00012 81 Coils Coil 40 60 - -
Pumo109g00012 81 ProSiteProfiles SANT domain profile. 1 55 IPR017884 -
Pumo109g00012 81 SUPERFAMILY Homeodomain-like 4 58 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo109g00012 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo109g00012 - - ccaj:114916639 111.309