Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo109g00011 ATGGCATCATCATGGACTCCAAGGCAGAACAAATTGTTTGAACAAGCCCTGGCTTTATATGACAGGGAAACCCCTGACAGATGGCAGAATGTGGCCAATGTGGTGGGAAGATCAGTAGAGGAAGTTAAAAGGCACTATGAGATCCTCAAAGAAGATGTCAAACGCATTGAACATGGCCAAGTCCCTTTTCCTCGTTACAAAACCAACACCAACACCGACACCAACAACTAA 231 0.4502 MASSWTPRQNKLFEQALALYDRETPDRWQNVANVVGRSVEEVKRHYEILKEDVKRIEHGQVPFPRYKTNTNTDTNN 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo109g00011 76 CDD SANT 4 50 IPR001005 -
Pumo109g00011 76 FunFam Transcription factor SRM1 1 63 - -
Pumo109g00011 76 Gene3D - 2 63 - -
Pumo109g00011 76 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Pumo109g00011 76 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Pumo109g00011 76 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 74 IPR044636 GO:0003700
Pumo109g00011 76 SMART sant 1 52 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo109g00011 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo109g00011 - - lja:Lj4g3v0973380.1 144.05