Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo108g00001 ATGGACCTGGAGGTGCTGGAGGTGGTGGCGGAGGGCGGCTACGGGCGCGTGTTCCGGTGCCGCGACCTCGACACGGGCGAGCTCGTGGCCATGAAGCAGATCACGATCGTGAGCTCGAGCCAGGGCGTTCCGGGGCCAATCATCCGCGAGGTGTCGCTCCTGAAAGAACTGCACCACGCCAACATCGTGAAGCTGCTGAGGGTGGGATTCACCGAGAACCGACACGTCAACCTCGTCTTCGAGCATCTCGATTACGACCTTCATCAGTTCATTCTCAATGGACGTTGCCCCAAGGATGCCATGACTATAAAGAGTTTCATGTACCAGATACTATCTGCCGTGGCACACTGTCACTCACGTAAGGTTCTGCATAGAGATTTGAAACCAAGGAATGTGCTGATCGATCATTCTAAAAGGTTGATCAAGCTGGCGGATTTCGGTTTGGCTAGAGAGTTTGCAGATGACTTGTTATACTCTGAGAAGTTAGGAACTTCCTGGTATAGGGCACCTGAAATCTTGTGTGACTCCAGACAATATTCAACTCCAGTTGATTTGTGGTCTGTTGGCTGCATATTTGCTGAGATGGTAATTGGACAGCCTTTATTCCAAGCTATTAATTCCCGGGATGAATTGGAGGCAATTTTCAGATTGTTAGGTACCCCCACTGAGGAAACATGGCCAGGAATCACTAAATTAATGCCGAACCTTCATATCTACTACCCCAAATTTGATCCACTGGGCCTGGAAACATTTGTTACTGATCTGGAACGAAGTGGTCTGAATCTTCTATCAATGATGCTTTGCATGGACCCAAATAAAAGAATTTCTGCAGAAGCTGCTCTAAAGCATGCTTACTTTAGGGATTTGATTTTGGAAGGAAAGCAAGTGGAGCAGCCATCGAGATGCATTCCCTTTCCATGA 921 0.4843 MDLEVLEVVAEGGYGRVFRCRDLDTGELVAMKQITIVSSSQGVPGPIIREVSLLKELHHANIVKLLRVGFTENRHVNLVFEHLDYDLHQFILNGRCPKDAMTIKSFMYQILSAVAHCHSRKVLHRDLKPRNVLIDHSKRLIKLADFGLAREFADDLLYSEKLGTSWYRAPEILCDSRQYSTPVDLWSVGCIFAEMVIGQPLFQAINSRDELEAIFRLLGTPTEETWPGITKLMPNLHIYYPKFDPLGLETFVTDLERSGLNLLSMMLCMDPNKRISAEAALKHAYFRDLILEGKQVEQPSRCIPFP 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo108g00001 306 Gene3D Transferase(Phosphotransferase) domain 1 85 301 - -
Pumo108g00001 306 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Pumo108g00001 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
Pumo108g00001 306 FunFam Cell division control protein 2 like 85 292 - -
Pumo108g00001 306 Gene3D Phosphorylase Kinase; domain 1 2 83 - -
Pumo108g00001 306 ProSiteProfiles Protein kinase domain profile. 3 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo108g00001 306 CDD STKc_CDK_like 4 286 - -
Pumo108g00001 306 PANTHER CELL DIVISION PROTEIN KINASE 4 286 - -
Pumo108g00001 306 Pfam Protein kinase domain 5 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo108g00001 306 SMART serkin_6 3 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo108g00001 4 289 Core Cell Cycle Gene Families AT3G48750 52.083 3.66e-99 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pumo108g00001 Pkinase 1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo108g00001 K02206 - gmx:100810997 503.827