Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo104g00004 ATGACATTGGTGCGGAGATCACATTCTTTTGGTCCAAATCCTTCCCCCATTGATGTTGAATCTGTGACGAACTCTCACTATGATTTACTTGGATCTTATGTTGGAAGCACCAAAAAGGCCAAAGAATCAATCTTTTATTCTTATAAGAGATATATTAATGGCTTTGCTGCAGTACTTGATGAAGACGAAGCAACGAAGGTTGCAAAGCATCCGAATGTGATATCAGTTATTTTAAACAAAGAACGGAAATTGCTCACAACACACTCATGGAATTTCCTTGGATTAGAGAGAAATGGTGTATTCCCACAGGCCTCAGTATGGCGGAAGACAATGGGTGAAGATATCATCATTGGAAATATAGACACAGGTAGTGTTTGGCCTGAATCCAAGAGTTTTAGTGATGAAGGTTTTGGACCGATCCCAAAACGGTGGCGTGGAATCTGTCAAACAGAAGATAAATTACACTGCAACAGGAAGCTTATTGGAGCAAGATATTTTTACAAAGGTTATGAGGCTAGTATTGGTAGAAAACTGAATGCCTCGGAGCTTAGTGCACGTGACTATGAAGGTCATGGTTCACATACTTTATCAACAGCAGGTGGTAACTGTGTTCCTGGAGCTAGTGTGTTTGGCTTTGGCAATGGAACTGCAAGCGGTGGATCACCAAAATCTCGAGTTGCAGCCTATAAGGTGTGTTGGCCATCTACTAACTTTCTCTGTGGTGGTGGATGTTTGGATGCAGACATTTTGGCTGCTTTCAAGGCTACCATAAGTGACGGCGTTAATGTGATTTCGATGTCTTTGGGTTTAGATGATCCCCCGGAATATTTTCAATGCGTTATGTCAATAGGGTCCTTCCATGCAGTTGCCAACAACATAATAGTAGTGGCTTCTGGAGGAAATTCAGGACCTTTTCCTGGAACTGTAACCAATGATGAACCTTGGATGCTCACAGTTGCCGCAAGCACAATTGATAGAGACTTCGCTGGTTATGTTACACTTGGTGACAAGAATGTTACACTTGGTGACAAGAAAATTATCAAGACACGGCTTGAAATTCTAGCCGAACCCCATTTGCTTCCTGCTTTGAATGTTGGCTTCGCGAATGGCAATTACATTTATAATTACATCAGCAGCACCAAGTCTCCTGTGGCTTACATTTCTAGAGTGAAAACAGAATTGGGTGTGAAGCCATCTCCATATGTGGCTCCATTTTCAGCAAGGGGTCCCAATCAACTTGAGCCAGCAATCCTCAAGCCTGATGTCACTGCTCCAGGAGTCAACATCATCGCTGCTTATAGTGAAGCCATATCTCCCACAGAACTACATGCTGACAAACGAACAACTCCTTACCTTACTTTGTCCGGCACTTCAATGTCATGTCCTCATGTTGCTGGCCTTGCTGGGTTGCTCAAAGCCCATCATCCAGATTGA 1434 0.4303 MTLVRRSHSFGPNPSPIDVESVTNSHYDLLGSYVGSTKKAKESIFYSYKRYINGFAAVLDEDEATKVAKHPNVISVILNKERKLLTTHSWNFLGLERNGVFPQASVWRKTMGEDIIIGNIDTGSVWPESKSFSDEGFGPIPKRWRGICQTEDKLHCNRKLIGARYFYKGYEASIGRKLNASELSARDYEGHGSHTLSTAGGNCVPGASVFGFGNGTASGGSPKSRVAAYKVCWPSTNFLCGGGCLDADILAAFKATISDGVNVISMSLGLDDPPEYFQCVMSIGSFHAVANNIIVVASGGNSGPFPGTVTNDEPWMLTVAASTIDRDFAGYVTLGDKNVTLGDKKIIKTRLEILAEPHLLPALNVGFANGNYIYNYISSTKSPVAYISRVKTELGVKPSPYVAPFSARGPNQLEPAILKPDVTAPGVNIIAAYSEAISPTELHADKRTTPYLTLSGTSMSCPHVAGLAGLLKAHHPD 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo104g00004 477 CDD Peptidases_S8_3 83 477 IPR034197 -
Pumo104g00004 477 Gene3D Peptidase S8/S53 domain 395 477 IPR036852 GO:0004252|GO:0006508
Pumo104g00004 477 Gene3D Peptidase S8/S53 domain 114 324 IPR036852 GO:0004252|GO:0006508
Pumo104g00004 477 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 5 85 IPR037045 -
Pumo104g00004 477 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 342 IPR045051 -
Pumo104g00004 477 Gene3D - 350 394 - -
Pumo104g00004 477 Gene3D - 325 340 - -
Pumo104g00004 477 SUPERFAMILY Subtilisin-like 104 477 IPR036852 GO:0004252|GO:0006508
Pumo104g00004 477 Pfam Subtilase family 112 476 IPR000209 GO:0006508|GO:0008236
Pumo104g00004 477 PRINTS Subtilisin serine protease family (S8) signature 112 131 IPR015500 -
Pumo104g00004 477 PRINTS Subtilisin serine protease family (S8) signature 187 200 IPR015500 -
Pumo104g00004 477 PRINTS Subtilisin serine protease family (S8) signature 455 471 IPR015500 -
Pumo104g00004 477 ProSiteProfiles Serine proteases, subtilase domain profile. 89 477 - -
Pumo104g00004 477 Pfam Peptidase inhibitor I9 18 84 IPR010259 -
Pumo104g00004 477 FunFam Subtilisin-like protease SBT5.3 5 85 - -
Pumo104g00004 477 ProSitePatterns Serine proteases, subtilase family, serine active site. 456 466 IPR023828 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo104g00004 352 476 Subtilisin-like Serine Gene Family AT5G59810 54.400 5.36e-40 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo104g00004 - - lja:Lj4g3v1388200.1 626.706