Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo104g00002 ATGCTTCTCACCTTTCAGAAGCCTACTGCTCAAAGAACCACCGAGAAGGCCAAAGAAGCAATTTTTTATTCTTATAAGAGATATATTAATGGCTTTGCCGCAGTACTTGATGAAGACGAAGCAGCGAAGGTTGCAAAGCATCCGAATGTGATATCAATTATTTTAAACAAAAAACAGAAATTGCACACAACACACTCATGGAATTTCCTTGGGTTAGAGAGAAATGGTGTATTCCCAGAGGCCTCAGTATGGCGAAAGACACTGGGTGAAGATATCATCATTGGAAATATAGACACAGGTAGTGCTTGGCCTGAATCCAAGAGTTTTAGTGATGAAGGGTTTGGACCCATCCCAAAACGGTGGCGAGGAATCTGTCAAACAGAAGATAAATTTCACTGCAACAGGAAGCTTATTGGAGCAAGATATTTTTACAAAGGTTATGAGGCTAGTATTGGTAGAAAACTGAATGCCTCGAATTTTAGTGCACGTGACTATGCAGGTCATGGTTCACATACTTTATCAACAGCAGGTGGTAACTTTGTTCCAGGAGTTAGTCTATTTGGCTTTGGCAATGGAACAGCAAGTGGTGGATCACCAAAAGCACGAGTTGCAGCCTATAAAGCGTGTTGGCCATCTACTGGCTTGTTCGGTGATGGTGGATGTTATGATGCAGACGTTTTGGCTGCTTTTGAGGCTGCCATAAGTGACGGCGTTAACGTGATTTCGGTGTCTTTGGGTTCAATTATTTCCTCGGAATATTTTCAAAGCGCTATTTCAATAGGGTCCTTCCATGCAGTTGCCAACGACATAACTGTAGTAGCTTCTGGAGGAAATGTAGGACCTATTCCTGGAACTGTATCCAACAATGAACCATGGACGCTCACAGTTGCAGCAAGCACAATTGATAGAGACTTCGCTAGTTATGTTACACTTGGTGACAAGAAAATTATCAAGGTATATTGGTTTATTGTAGAACTTTGTCTTTCTTGTTATATGAAAACATATGCCACTTTAGTTTTTGTTTTTTTGGCTTTTAATGCTTTGTGCTTTAGAGGAACTCTTGATCCTGAGAAAGTAAAGGGAAAAATATTGGTCTGTTTTGCTGAGGGAACTGGCGTTGATCTGGAAGCTATTAGGATAGGCGCTGTTGGAATGATCTTGACCTATGTCAACACAGGGCTTGAAATTCTAGCCGACCCCCAATTGCTTCCTGCTTCGAATGTTGACTTTGATAATGGCAATTACATTTATAATTACATCAGCAGCACCAAGTCTCCTGTGGCTTACATTTCTAGAGTGAAAACAGAATTGGGTGTGAAGCCATCTCCATATGTGGCTGCATTTTCATCAAGGGGTCCCAATCCCCTTGAGCCAGCAATCCTCAAGGTTCAATTCATCATCGCTGCTTATAGTGAAGCCATATCTCCCTCAGGAATAAATGCTGACAAACGAAGAACTCCTTATGTTGCTTTGTCCGGCACTTCAATGGCATGTCCTCATGTTGCTGGCCTTGTTGGGTTGCTCAAAGCCCTTCATCCAGATTGGAGCCCAGCTGCTATTAAGTCAGCAATCACTACCTCAGCAACTACAATAGATAACACTGGAAGGCCTATCGTGGATACATCATTGAACGAGGCAAATCCATTTGATTATGGAGCAGGTCTCATTCAACCTAATCGTGCTGCGGACCCTGGACTTGTATATGACCTAAATATTGCTGATTATTTGAACTTTTTGTGTGGTCGTGGCTACAACAGTTCCCAGCTTAAGTTGTTCTACGGCAAGCCTTACACTTGTCCAAAGTCCTTCAGTTTAGCAGATTTCAATTATCCAGCAATCACAATTCCTCATTTAGAACCTGGACATTCTCTGAAGGTTACTCGAATTGTTACTAATGTTGGGTCCCCAAGAACGTATAGAGTGCACATCAAGGCACCACCACAAGTTGCAGTTTCGGTTAAGCCTAGGAAACTGAGGTTCAAGAAAAAGGGAGAAAAGAAGGAGTTCAAAGTTACATTGACCTTGAAGCCGCAAACTAAGAACACCACTGATTACGTATTCGGGTGGTTGACGTGGACTGATCACAAGCACCATGTCAGGAGTCCCATTGCAGTTAACATAACACATTAA 2130 0.4221 MLLTFQKPTAQRTTEKAKEAIFYSYKRYINGFAAVLDEDEAAKVAKHPNVISIILNKKQKLHTTHSWNFLGLERNGVFPEASVWRKTLGEDIIIGNIDTGSAWPESKSFSDEGFGPIPKRWRGICQTEDKFHCNRKLIGARYFYKGYEASIGRKLNASNFSARDYAGHGSHTLSTAGGNFVPGVSLFGFGNGTASGGSPKARVAAYKACWPSTGLFGDGGCYDADVLAAFEAAISDGVNVISVSLGSIISSEYFQSAISIGSFHAVANDITVVASGGNVGPIPGTVSNNEPWTLTVAASTIDRDFASYVTLGDKKIIKVYWFIVELCLSCYMKTYATLVFVFLAFNALCFRGTLDPEKVKGKILVCFAEGTGVDLEAIRIGAVGMILTYVNTGLEILADPQLLPASNVDFDNGNYIYNYISSTKSPVAYISRVKTELGVKPSPYVAAFSSRGPNPLEPAILKVQFIIAAYSEAISPSGINADKRRTPYVALSGTSMACPHVAGLVGLLKALHPDWSPAAIKSAITTSATTIDNTGRPIVDTSLNEANPFDYGAGLIQPNRAADPGLVYDLNIADYLNFLCGRGYNSSQLKLFYGKPYTCPKSFSLADFNYPAITIPHLEPGHSLKVTRIVTNVGSPRTYRVHIKAPPQVAVSVKPRKLRFKKKGEKKEFKVTLTLKPQTKNTTDYVFGWLTWTDHKHHVRSPIAVNITH 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo104g00002 709 CDD PA_subtilisin_like 308 430 - -
Pumo104g00002 709 FunFam Subtilisin-like protease SBT1.5 579 708 - -
Pumo104g00002 709 ProSitePatterns Serine proteases, subtilase family, serine active site. 493 503 IPR023828 -
Pumo104g00002 709 Gene3D Peptidase S8/S53 domain 91 575 IPR036852 GO:0004252|GO:0006508
Pumo104g00002 709 Pfam Subtilase family 89 536 IPR000209 GO:0006508|GO:0008236
Pumo104g00002 709 PRINTS Subtilisin serine protease family (S8) signature 89 108 IPR015500 -
Pumo104g00002 709 PRINTS Subtilisin serine protease family (S8) signature 492 508 IPR015500 -
Pumo104g00002 709 PRINTS Subtilisin serine protease family (S8) signature 164 177 IPR015500 -
Pumo104g00002 709 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 705 IPR045051 -
Pumo104g00002 709 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 4 62 IPR037045 -
Pumo104g00002 709 Gene3D - 302 437 - -
Pumo104g00002 709 Pfam Peptidase inhibitor I9 13 62 IPR010259 -
Pumo104g00002 709 Gene3D - 579 708 - -
Pumo104g00002 709 Pfam Fibronectin type-III domain 607 705 IPR041469 -
Pumo104g00002 709 SUPERFAMILY Subtilisin-like 61 566 IPR036852 GO:0004252|GO:0006508
Pumo104g00002 709 ProSiteProfiles Serine proteases, subtilase domain profile. 66 562 - -
Pumo104g00002 709 CDD Peptidases_S8_3 59 529 IPR034197 -
Pumo104g00002 709 FunFam Subtilisin-like protease SBT1.5 91 312 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo104g00002 15 708 Subtilisin-like Serine Gene Family AT5G59810 53.586 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo104g00002 - - ccaj:109807325 954.896