Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01594 ATGGATCATGTTCAAGAAGGACTGCCCATTCTCTCTCCTGACGAAAGACATAGTGAAGCTCCAGCAACAGAAGCTAACGCTTCATTGACCCCACCCCACCCCCATCTCCCAATGCCTACCACCTCTGCTCATCCCGCTGACCGCAAAGATGTCATCGTCCATATCAACGAAGGCAATCCCACTACTACTTTGTGGAGAGGCTCTAGCTATGATTTCTGGAATGGTGCAGAGAAGAGTCCCCACGACGATGCTGCTGGTTTTAACTTTCAGCCACCTGCTTCTGCCCAAGCAGCTCGGTCTATTGAGGATCCACCCTCCAGGTTGCTTGGCCAGTTCTTGCATAAGCAGAAAGCGTCGGGGGATCATGCTTTGGATATGGATTTAGAGATGGATGAGCTACGTGAGGACAGGAATTCGCCTGCCGTTAACGACTCTCCCCCGTTTCTGGAGACTTCAAAGGAGCTCAAGGTGTCGTTTCATCCATCGGTTTCGAATGTGGCCGAACAGCCTGACGATTCCGTTAGGAGACGTTATAGGGACGCCGTCGGAGATGAAGAGTTTCATAAACAGCAAAGGTACGAGCCGCATGGTTCGCTGAGTGTCCATGAGAGTGCTGATAGCGATGACGGTGCTGAGGTGGTCAAGTGTACCTCCAGTGCTACGGTGGATAGGAACATATCGTTTCAGAAAAGGTCAAGCTTGTTGAGGGCGAAGACGCGGTCCAGACTGATGGACCCACCTGAGGAACCAACTTGGAAGTCAGGTCGGATACCAAAATCGGGTCCAATTCCAAAATCAGGTCCAATTCCAAAATCCGGATTTCTGGGAAGAATGGATGATGAGGAAGATGACCCCTTCAAGGAAGAGGACTTACCAGAGAAGTACAGCAAGGTTACTTTTAATACTTTAACTTTCATGCAGTGGGTGAGTTTGGTTTTGATTGTTGCATTTTTGACGTGTTCCCTTGCCATTCCATATCTGAGACAAAAGGATCTTTGGCAACTACAGTTATGGAAATGGGACGTCATGATTTTGGTTTTAATCTGTGGTCGTTTAGTTTCCGGGTGGGGGATTAGAATTGTAGTCTTTTTCGTAGAAAGAAACTTCTTTTTGAGAAAGAGGGTTTTGTATTTTGTGTACGGAGTAAGGAAACCAGTACAAAATTGTCTATGGTTAGGTCTTGTTTTGATTGCCTGGCATTGTCTGTTTGATAAGCAAGTTCAGAGAGAGACCCATAATAACGTCGTTCTGGAGTATGTCACCAAGATTTTGATATGCTTCTTAGTGGGTACCTTGGTTTGGCTGGTGAAGACTCTCATAGTCAAGGTTTTAGCTTCTTCTTTCCATGTCAGCACCTATTTCGACAGGATTCAGGAGTCGCTTTTCAATCAATTTGTCATCGAAGCGCTATCTGGACCACCGTTGGTGGAACTGCAGAAGGCGGAAGAAGAGGAGGAAAGGCTTGCTGATGAGTTTGAGAAGCTGCAGAGCGCCGGAATAAACATACCAGCTGACCTTAGGGCATCTGCATTCCAGTCAGCAAAGAGCGGAAGACTGATTGGGAGTGGAAGAGGTCAGAAAAGCGCCCAATTTAGAAGTGGAAAAATTTCTCAAGCACTTTCCAGGAAGCGAGAGGAAGGGATTACTATTGATCATCTTCACAAGATGAATCCAAATAATGTGTCTGCATGGAATATGAAAAGACTAATGAACATAATTCGGCATGGCTCAATTACAACACTCGATGAGCAGGCAGTGGGTTCGCTTCAAGAAGATGAGTCTGCCACACAAATAAAAAGTGAAAACGAAGCCAAGGCAGCAGCTAAGAAGATATTTGAGAATGTTGCAAGACGCGGATCAAGGTACATTTACCCTGAGGATTTAGTGCGCTTTATGCGCGAAGATGAAGCTCTAAAAACCATGAGTCTTTTTGAAGGGGCCTCTGATAGTGGAAAGATTAGTAGATCATCACTGAAGAACTGGGTGGTAAATGCATTCCGAGAAAGGAGAGCACTTGCACTAACTTTGAATGATACAAAAACAGCAGTGAACAAACTTCATAGGATGACCAACTTTATCGTTGCTATTATTATACTGGTTATGTGGCTTCTGATATTGGACATTGCAACATCCCAATTTCTCGTCTTCACTAGCTCGCAACTCGTCCTGGCAGCTTTTATATTTGGAAACACGTGCAAAACAGTTTTTGAAGCAATCATATTCTTATTTGTGATACACCCATTTGATGTGGGGGATAGGTGTGAAATCGACGGAGTTCAGATGGTTGTAGAAGAAATGAACATTCTGACAACTGTATTTCTGAGGTATGACAATATGAGGCTTATTTTTCCAAATAGCATTCTTGCCATGAAGCCCATCCACAACTTCTATCGCAGTCCTGATATGGGAGACGCTGTTGAATTCTGTGTCCATATCGCTACACCCGCTGACAAGATTGCAGCGATGAAACAGAGAATAATAAGCTACATCGATAACAAGAAGGATCATTGGTATCCTTCTCCTATGTTTGTGGTCAAGGATGTGGAAGAACTGAACAGGTTAAGAATTGCAGTATGGCTGTGTCACAGAATGAATCACCAAGACATTGGTGAGAAGTGGTTAAGAAGGGCTCAGCTGGTTGAAGAGATGACCAAGATCTTCCGAGAACTTGACATTCAGTACCGTTTGCTTCCACTTGACATTAACGTTCTTAATGTGCCTCCAGTCACTTCTGAACGGGTTCCTCCTAGTTGGATGGCAACGAGAGGTTGA 2772 0.4481 MDHVQEGLPILSPDERHSEAPATEANASLTPPHPHLPMPTTSAHPADRKDVIVHINEGNPTTTLWRGSSYDFWNGAEKSPHDDAAGFNFQPPASAQAARSIEDPPSRLLGQFLHKQKASGDHALDMDLEMDELREDRNSPAVNDSPPFLETSKELKVSFHPSVSNVAEQPDDSVRRRYRDAVGDEEFHKQQRYEPHGSLSVHESADSDDGAEVVKCTSSATVDRNISFQKRSSLLRAKTRSRLMDPPEEPTWKSGRIPKSGPIPKSGPIPKSGFLGRMDDEEDDPFKEEDLPEKYSKVTFNTLTFMQWVSLVLIVAFLTCSLAIPYLRQKDLWQLQLWKWDVMILVLICGRLVSGWGIRIVVFFVERNFFLRKRVLYFVYGVRKPVQNCLWLGLVLIAWHCLFDKQVQRETHNNVVLEYVTKILICFLVGTLVWLVKTLIVKVLASSFHVSTYFDRIQESLFNQFVIEALSGPPLVELQKAEEEEERLADEFEKLQSAGINIPADLRASAFQSAKSGRLIGSGRGQKSAQFRSGKISQALSRKREEGITIDHLHKMNPNNVSAWNMKRLMNIIRHGSITTLDEQAVGSLQEDESATQIKSENEAKAAAKKIFENVARRGSRYIYPEDLVRFMREDEALKTMSLFEGASDSGKISRSSLKNWVVNAFRERRALALTLNDTKTAVNKLHRMTNFIVAIIILVMWLLILDIATSQFLVFTSSQLVLAAFIFGNTCKTVFEAIIFLFVIHPFDVGDRCEIDGVQMVVEEMNILTTVFLRYDNMRLIFPNSILAMKPIHNFYRSPDMGDAVEFCVHIATPADKIAAMKQRIISYIDNKKDHWYPSPMFVVKDVEELNRLRIAVWLCHRMNHQDIGEKWLRRAQLVEEMTKIFRELDIQYRLLPLDINVLNVPPVTSERVPPSWMATRG* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01594 923 MobiDBLite consensus disorder prediction 1 21 - -
Pte9g01594 923 MobiDBLite consensus disorder prediction 237 276 - -
Pte9g01594 923 MobiDBLite consensus disorder prediction 184 210 - -
Pte9g01594 923 Gene3D - 747 796 IPR023408 -
Pte9g01594 923 Coils Coil 475 498 - -
Pte9g01594 923 MobiDBLite consensus disorder prediction 184 212 - -
Pte9g01594 923 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 37 918 IPR016688 -
Pte9g01594 923 MobiDBLite consensus disorder prediction 1 44 - -
Pte9g01594 923 FunFam Predicted mechanosensitive ion channel 747 796 - -
Pte9g01594 923 Pfam Mechanosensitive ion channel 689 893 IPR006685 GO:0016020|GO:0055085
Pte9g01594 923 SUPERFAMILY Sm-like ribonucleoproteins 737 796 IPR010920 -
Pte9g01594 923 PIRSF Memb_At2g17000 37 923 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01594 Pte-Chr9 36993203 36997337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01594 46 920 Mechanosensitive Ion Channel Family AT1G78610 55.788 0.0 911
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01594 K22048 - qsa:O6P43_011418 1199.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01594 9 36993203 36997337 Pte9g01594 9 36993203 36997337 RCT