Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01578 ATGCTGCGAGTTTCTGTTCTACGAGCGAAGAAGTTGAAGGCTTTGAAGCCTCAGATCTTTGCTTTCTATGAAAACTCTCACTTCTCTACAGTAGCCGAGCCTTCTTCCAGACAACGGAATCCTCAAAAGGTTCCAAATCTTATTGGGGGCATATTTTCTGATTCAAAATCAACGGATTTTATTGATGTTAAAAACCCTGCAACACAAGAAGTTGTTTCCCAAGTTCCTTTGACTACAAATGAGGAATTTAAAGCTGCAGTAGCTGCTGCAAAGCAGGCATTTCCATCGTGGCGCAATACACCCGTCACAACGCGCCAGCGTGTAATGCTCAAGCTCCAAGAGCTTATTCGTAGAGATATTGATAAGCTTGCTTTGAATGTCACTACTGAACAAGGAAAGACATTGAAGGATGCACAAGGAGATGTCTTCCATGGCCTAGAGGTTGTGGAACATGCTTGTGGAATGGCAACTCTACAAATGGGAGAGTATGTTCCCAACGTGTCACATGGAATTGATACTTTCAGCATTAGAGAGCCTCTTGGTGTTTGTGCAGGAATTTGTCCTTTCAACTTTCCAGCAATGATACCCTTATGGATGTTCCCAGTTGCAGTTACATGCGGAAATACATTTATATTAAAGCCATCGGAGAAAGATCCAGGGGCTTCTGTAATGCTTGTGGAATTAGCAATGGAGGCTGGTTTACCTGATGGTGTCTTAAATATTGTTCATGGCACACATGACATTGTTAATGCTATTTGTGATGATGATGACATTAAAGCTGTGTCATTTGTGGGTTCAAATATTGCTGGTATGCACATATATGCACGAGCATCTGCAAAAGGTAAACGAGTTCAGTCAAACATGGGGGCCAAAAATCACGCTATAGTCATGCCTGATGCAAATCTTGATACTACCATAAACTCATTAGTAGCTGCTGGTTTTGGTGCTACCGGACAAAGGTGCATGGCTTTGAGTACTGTTGTCTTTGTCGGAGGCTCAAAGCTCTGGGAAAATAAGCTGGTGGAGCGAGCCAAAGCTCTTAAAGTAAATGCTGGAATTGAACCTGATGCTGACCTTGGTCCAGTGATCAGTAAACAGGCAAAGGAACGGATACACAGATTGATTGAAACAGGGATTGAAAGTGGTGCCAGGATATTGCTTGATGGAAGAAGTATAAAAATACCTCTCATTCTCTGA 1197 0.4244 MLRVSVLRAKKLKALKPQIFAFYENSHFSTVAEPSSRQRNPQKVPNLIGGIFSDSKSTDFIDVKNPATQEVVSQVPLTTNEEFKAAVAAAKQAFPSWRNTPVTTRQRVMLKLQELIRRDIDKLALNVTTEQGKTLKDAQGDVFHGLEVVEHACGMATLQMGEYVPNVSHGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVMLVELAMEAGLPDGVLNIVHGTHDIVNAICDDDDIKAVSFVGSNIAGMHIYARASAKGKRVQSNMGAKNHAIVMPDANLDTTINSLVAAGFGATGQRCMALSTVVFVGGSKLWENKLVERAKALKVNAGIEPDADLGPVISKQAKERIHRLIETGIESGARILLDGRSIKIPLIL* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01578 398 Pfam Aldehyde dehydrogenase family 54 390 IPR015590 GO:0016491
Pte9g01578 398 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 46 394 IPR010061 GO:0004491
Pte9g01578 398 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 48 288 IPR016162 GO:0016491
Pte9g01578 398 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 6 395 IPR010061 GO:0004491
Pte9g01578 398 SUPERFAMILY ALDH-like 41 392 IPR016161 GO:0016491
Pte9g01578 398 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 314 325 IPR016160 GO:0016491
Pte9g01578 398 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 48 295 - -
Pte9g01578 398 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 289 391 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01578 Pte-Chr9 36818636 36823292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01578 1 395 Aldehyde Dehydrogenase Gene Family AT2G14170 77.215 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01578 K00140 - qsa:O6P43_012446 664.07