Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01575 ATGGACAAGTCTAATAGTGAACTCGAGCAAGCTTCGGAAACGCAACCATCTTCGAACTCCAGTACTAAAGGTCTCACTCAGCAGACACCGGAAGAGCTTGTGGCAAGGTCTATCGCTCCAGTTAAAAAGGAGTTTCTTCGTCCACCACCTCTTCGATCTTGTTCCAGTGAACAGAAAGATGGAGTTTCTGGTACCAATGGTGCGGATAAACCTGCTGTTCAACCTGGTTTAGTTAAGGAGAAGAAGTCCAAACGCCAACTCAAAAGGGAACGCCTTCAGGAACAGAAGTCTGTGAGGAATCTATGTCCTGAGATTGCAAGGACAGGAGATGTGAATTCATGCTCCTATAATGACAAGTGCCGCTTCAGCCATGATGTAGAAACTTTTAAGGCTCAGAAACTGGCTGATCTAGAGGGAGAATGTCCTTTTTTCAAATCAGACGGGCGTTGTTGCCCTTATGGATTGACATGCAGGTTTTATGGTTCGCATGTAAATAGTTTACCTGCTGGCAAGCTTGGTGAGAAGAAGACTTCAGAGATAAATGGATTAAAAAAAGATACTCAAAAGCTTTTGTGGAAGAATAAAATGCTATTTCCTAAGGCAGATGCCAAGCTTCGAGAGCTTGGTCTCTCTGTAATGGCTAAATCCAAGAAGCAAAATTTGAAAGATGAAGATGGGAACAAGAATGGAATGAACTCTGTCCAGAAAGCTGATAATAATGTTTCTGAAGAATTAAATCGTAACTTGGACAATAAGTTGGAATCCTCTGCCGGCATTCCTGAGGAGGATGATGTGGATGGAAATGCAGAGACTGTTGTGTTCCCTCCCTTGAAGAAACCTAAATCTGAAGTTAACGACGATCAGAAGGCTGACAAATCTAAAAATGAAGCTATGGATGTTACTGAACCTTCTGGTGAAAACGGTATACATGCTGAGGTAGAAGCTGAAAATGGTGTAACACCCCCAGAAACAGACAGGAGTCTGAAGTTAAATCGACGAGAGAAGAAGCTCATCGATTTCAGAGAGAAATTATATCTTGCACCCTTGACAACGGTCGGTAATCTTCCTTTCCGGAGGGTTTGCAAAGTATTGGGTGCAGATGTAACTTGTGGTGAGATGGCAATGTGTACAAATCTCTTGCAGGGTCAAGCATCAGAGTGGGCACTTCTGAGACGGCACTCATCAGAAAACTTGTTTGGTGTTCAAATATGTGGTGCACATCCCGATACTGTTGCACGAGCTGTCGAGCTTATAGATCAGGAATGCACAGTAGACTTCATTGATATAAACATGGGATGCCCAATTGATATTGTTGTAAACAAAGGTGCTGGATCAGCGCTTCTAACAAAGCCAATGCGGATGAAGGGAATTGTTGAAGTTGCTTCAGGCATAGTGGACAAGCCTATAACCATCAAGGTTCGCACCGGTTATTTTGAAGGCAAGAATCGTGTTGATTCACTCATTGCAGACATTGGCAACTGGGGAGCCAGTGCAGTCACAGTGCATGGTCGAACACGTCAACAGCGGTATAGCAAGCTTGCTGATTGGGACTATATTTATCAATGTGCCAGAATGGCTCCCAGCACTTTGCAAGTCTTGGGAAATGGGGATGTTTTCTCATATTTAGATTGGAATAGACACAAGGCTGAATGTCCTGAGCTTGCTACATGTATGGTTGCTCGTGGAGCCCTGATTAAGCCTTGGCTTTTCACTGAAATTAAGGATCAAAGGCACTGGGACATCAGTTCTGGTGAAAGGCTAAATATTTTGAAGGATTTTGTGCATTTTGGTCTTGAACATTGGGGTTCTGATACAAAAGGTGTTGAAACCACTAGGCGTTTCTTGTTGGAATGGCTTAGCTACACGTATAGGTACGTACCAGTTGGCCTTTTAGATGTTGTCCCACAACGGTTGAACTGGCGTCCTCCATCTTACTACGGGCGCGATGATCTTGAGACCCTCATGGCCTCTGATTCTGCAGCTGACTGGATACGAATATCTGAGATGCTACTTGGCAAGGTTCCAGAGGAATTTACATTTGCACCAAAACACAAATCAAATGCCTATGACAAAGCTGAAAATGGCTAA 2088 0.4363 MDKSNSELEQASETQPSSNSSTKGLTQQTPEELVARSIAPVKKEFLRPPPLRSCSSEQKDGVSGTNGADKPAVQPGLVKEKKSKRQLKRERLQEQKSVRNLCPEIARTGDVNSCSYNDKCRFSHDVETFKAQKLADLEGECPFFKSDGRCCPYGLTCRFYGSHVNSLPAGKLGEKKTSEINGLKKDTQKLLWKNKMLFPKADAKLRELGLSVMAKSKKQNLKDEDGNKNGMNSVQKADNNVSEELNRNLDNKLESSAGIPEEDDVDGNAETVVFPPLKKPKSEVNDDQKADKSKNEAMDVTEPSGENGIHAEVEAENGVTPPETDRSLKLNRREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSENLFGVQICGAHPDTVARAVELIDQECTVDFIDINMGCPIDIVVNKGAGSALLTKPMRMKGIVEVASGIVDKPITIKVRTGYFEGKNRVDSLIADIGNWGASAVTVHGRTRQQRYSKLADWDYIYQCARMAPSTLQVLGNGDVFSYLDWNRHKAECPELATCMVARGALIKPWLFTEIKDQRHWDISSGERLNILKDFVHFGLEHWGSDTKGVETTRRFLLEWLSYTYRYVPVGLLDVVPQRLNWRPPSYYGRDDLETLMASDSAADWIRISEMLLGKVPEEFTFAPKHKSNAYDKAENG* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01575 695 ProSiteProfiles Zinc finger C3H1-type profile. 96 127 IPR000571 GO:0046872
Pte9g01575 695 ProSiteProfiles Zinc finger C3H1-type profile. 140 166 IPR000571 GO:0046872
Pte9g01575 695 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 339 581 - -
Pte9g01575 695 Gene3D Aldolase class I 338 581 IPR013785 -
Pte9g01575 695 Gene3D - 92 169 - -
Pte9g01575 695 MobiDBLite consensus disorder prediction 1 93 - -
Pte9g01575 695 MobiDBLite consensus disorder prediction 8 33 - -
Pte9g01575 695 MobiDBLite consensus disorder prediction 226 241 - -
Pte9g01575 695 SMART c3hfinal6 137 163 IPR000571 GO:0046872
Pte9g01575 695 SMART c3hfinal6 97 126 IPR000571 GO:0046872
Pte9g01575 695 MobiDBLite consensus disorder prediction 217 241 - -
Pte9g01575 695 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 28 689 - -
Pte9g01575 695 Pfam Dihydrouridine synthase (Dus) 346 580 IPR035587 -
Pte9g01575 695 MobiDBLite consensus disorder prediction 280 299 - -
Pte9g01575 695 MobiDBLite consensus disorder prediction 253 307 - -
Pte9g01575 695 ProSitePatterns Uncharacterized protein family UPF0034 signature. 427 445 IPR018517 GO:0008033|GO:0017150|GO:0050660
Pte9g01575 695 SUPERFAMILY FMN-linked oxidoreductases 343 656 - -
Pte9g01575 695 MobiDBLite consensus disorder prediction 75 93 - -
Pte9g01575 695 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 92 170 - -
Pte9g01575 695 Pfam CCCH-type zinc finger 101 125 IPR041367 -
Pte9g01575 695 CDD DUS_like_FMN 343 578 IPR035587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01575 Pte-Chr9 36690829 36695290 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte9g01575 Dus 2.7e-51 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01575 K05544 - qsa:O6P43_002052 1036.17