Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01569 ATGGCACCAAGTCTATATGACTGCTATGATCCCTTGGATCCAAATGGGAACGTTACCGTCACTTTCGACATTTTACAGTGGACAGTTGATGGCTATCTGGCAAGGGTAACTATCCAAAACTACTATCAGTACCGACATGTTGACAAACCTGGTTGGAAACTTGGGTGGACATGGCCCAAACATGAAATCATTTGGTCAATGCGTGGTGCTTTTGCAATTATGCAAGGGAACTGCTCATCCTTCAAGACTATGATACCACACTCTTGTGAGAAAAGCCCTGTTATAGAGGATCTCAGTTTGAATGCCCCATGGGAGAACAAGTCAGAAAACTGCTGTCATGGTGGCCTTCTTGCTTCCTGGGCTATAGATCGTTCCACCTCATTTACCTCATTTGAAATGACTGTCGGAAATCTGCAAGCCAATTCTACTGGAAATGCACCTCAAGCTCTTACTTTGTTGGCACCTGGTCCTGGTTACACATGTGATCCAGTTGTAGACACTGCTCCTACAGTGACTGTTATTGATGGGAGAAGACGCGTTCAAGTTTACAGAACATGGAAATCAACCTGCACTTACTCCTCTTTTATTGCAAATAAGAAACCTGTTTGCTGTGTTTCAATGTCATCATTTTATAATCCCTCTGTGACACAATGTCCTAAATGCAGCTGTGGTTGCAGAGAAGCAGATGATAGTGTTTCTTCTTGTGTAAGCAGTGCCAGTCCCTCATCATTATCAGATAATATAGAAGATGATGCTGTACGGTGCACAGACCACATGTGCCCAGTTCAAGTTCATTGGCATGTCAAAAATAATTATATGGACTATTGGAGGGTGAAACTCACAATTTCCAATCATTACTATAAGAAAACCTACTCAGGCTGGAATGTATTGGTTCAGCATCCTGGTTTCAACCAAACTGCAAAGGCATATAGCTTCAACAGCACGATACTCCCCACAGTTGGACTTGGAGATGAGGCTGCTCTCTTTTGGGGGTTGGAGTACTACAATACTGAATTGTTACATTCAGACCCATATCAACTTGGATCAGTAACAACAGAAATACTATTGAAGAAGGACTTGAATCAGTTTACCTTACACAATGGATGGGCTTTTCCTCGCAGGATATACTTCGAGGGTGAGAATTGTGAGATGGCTTTTCCAGACACATTCCCTACGCTACCAAATGATGCCACTAGTTTCAGGCCTACTCATTGCATTTTGCTGCTTATCTTCTTCACATATCTGGTTTCAGAGCATTACTATAAGATTAATCATATATTATAG 1284 0.4198 MAPSLYDCYDPLDPNGNVTVTFDILQWTVDGYLARVTIQNYYQYRHVDKPGWKLGWTWPKHEIIWSMRGAFAIMQGNCSSFKTMIPHSCEKSPVIEDLSLNAPWENKSENCCHGGLLASWAIDRSTSFTSFEMTVGNLQANSTGNAPQALTLLAPGPGYTCDPVVDTAPTVTVIDGRRRVQVYRTWKSTCTYSSFIANKKPVCCVSMSSFYNPSVTQCPKCSCGCREADDSVSSCVSSASPSSLSDNIEDDAVRCTDHMCPVQVHWHVKNNYMDYWRVKLTISNHYYKKTYSGWNVLVQHPGFNQTAKAYSFNSTILPTVGLGDEAALFWGLEYYNTELLHSDPYQLGSVTTEILLKKDLNQFTLHNGWAFPRRIYFEGENCEMAFPDTFPTLPNDATSFRPTHCILLLIFFTYLVSEHYYKINHIL* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01569 427 PIRSF COBRA 1 422 IPR006918 GO:0010215|GO:0016020
Pte9g01569 427 Pfam COBRA-like protein 32 193 IPR006918 GO:0010215|GO:0016020
Pte9g01569 427 PANTHER PROTEIN COBRA 5 409 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01569 Pte-Chr9 36655925 36658455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01569 7 412 COBRA Gene Family AT3G02210 46.667 8.13e-142 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01569 - - qsa:O6P43_011508 608.601