Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01548 ATGGCAGGTTTTAGTGGCGATGAGACTGCTCCCTTCTTCGGCTTCCTTGGTGCAGCCGCCGCCTTGGTTTTCTCCTGCATGGGAGCTGCCTATGGCACGGCAAAGAGTGGTGTTGGCGTGGCCTCAATGGGGGTGATGAGGCCTGAGCTGGTGATGAAATCTATTGTTCCAGTTGTTATGGCTGGTGTGTTGGGTATTTATGGTCTTATTATTGCTGTTATCATCAGTACTGGGATCAACCCAAAGGCTAAATCTTATTATCTTTTCGATGGCTATGCACATCTCTCTTCTGGGCTTGCTTGTGGGCTTGCTGGACTGTCTGCTGGTATGGCGATCGGTATTGTTGGCGATGCTGGTGTGAGGTACAATGTTTCATCTGTTGACATCAAGAGCTGTTGCTTAGCTTTATTGACACTCACATCTTGTGATTCTTCAAATATATATGTTGAAGTTTCCATTTTCGTTTTTGATTTGATAGAATTGAGATCATTATCACTTTCCCTTTTTTTTCCGTAA 516 0.4477 MAGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRYNVSSVDIKSCCLALLTLTSCDSSNIYVEVSIFVFDLIELRSLSLSLFFP* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01548 171 PRINTS Vacuolar ATP synthase 16kDa subunit signature 29 53 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pte9g01548 171 PRINTS Vacuolar ATP synthase 16kDa subunit signature 106 132 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pte9g01548 171 PRINTS Vacuolar ATP synthase 16kDa subunit signature 55 79 IPR000245 GO:0033179|GO:0046961|GO:1902600
Pte9g01548 171 FunFam V-type proton ATPase proteolipid subunit 10 134 - -
Pte9g01548 171 SUPERFAMILY F1F0 ATP synthase subunit C 86 125 IPR035921 -
Pte9g01548 171 Pfam ATP synthase subunit C 16 75 IPR002379 GO:0015078|GO:0033177|GO:1902600
Pte9g01548 171 CDD ATP-synt_Vo_c_ATP6C_rpt1 12 79 - -
Pte9g01548 171 NCBIfam V-type ATPase subunit C 12 120 IPR011555 GO:0033179|GO:0046961|GO:1902600
Pte9g01548 171 Gene3D - 10 144 IPR035921 -
Pte9g01548 171 SUPERFAMILY F1F0 ATP synthase subunit C 13 76 IPR035921 -
Pte9g01548 171 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01548 Pte-Chr9 36525707 36530271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01548 1 126 Primary Pumps ATPases(2) AT2G16510 95.238 3.74e-80 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01548 K02155 - gmx:100777816 217.624