Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01508 ATGGCCAGTGCTGATGTTGAATTCCGTTGCTTCGTCGGAGGGCTCGCATGGGCCACCGACAGCGAAGCTCTCTCAAAAGCTTTTTCTCCTTACGGCGAAATCATCGATTCGAAGATCGTCAACGACCGTGAAACTGGAAGGTCAAGAGGTTTTGGATTCGTGACCTTTGCTACTGAGGAGGCCATGAGATCAGCCATAGAAGGGATGAACGGCTACCTTCTTGATGGCCGTAATATCACTGTCAACGAGGCTCAGTCTCGTGGAAGTGGCGGTGGTGGATTCAACCGCGGTGGAGGTGGCGGTCGTGGCGGAGGCGGCTATGGTGGCGGAGGCGGCTATGGTGGCGGTCGAGGCGGAGGCGGCTATGGTGGAGGCGGAGGCGGTCGTGGCTACAGTAGTGGAGGTGGCTATGGTGGTGGCGGCCGGGGCTACAGTGGTGGAGGCGGTTATGGAGGAGGCGGTGGTTATGGTGGTGGACGGGATCGCGGTTATGGAGATGGTGGAAACCGATTCTCAAGAGGCGGTGGTGACTCCGATGGCAGCTGGAGGAGTTGA 555 0.5856 MASADVEFRCFVGGLAWATDSEALSKAFSPYGEIIDSKIVNDRETGRSRGFGFVTFATEEAMRSAIEGMNGYLLDGRNITVNEAQSRGSGGGGFNRGGGGGRGGGGYGGGGGYGGGRGGGGYGGGGGGRGYSSGGGYGGGGRGYSGGGGYGGGGGYGGGRDRGYGDGGNRFSRGGGDSDGSWRS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01508 184 SMART rrm1_1 9 82 IPR000504 GO:0003723
Pte9g01508 184 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Pte9g01508 184 PANTHER GEO13361P1-RELATED 3 168 - -
Pte9g01508 184 Gene3D - 2 123 IPR012677 -
Pte9g01508 184 MobiDBLite consensus disorder prediction 150 184 - -
Pte9g01508 184 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Pte9g01508 184 CDD RRM2_NsCP33_like 9 84 - -
Pte9g01508 184 SUPERFAMILY RNA-binding domain, RBD 8 96 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01508 Pte-Chr9 36271258 36272407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01508 10 88 Eukaryotic Initiation Factors Gene Family AT4G34110 35.443 4.50e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01508 - K13195 ccaj:109800369 150.984