Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01507 ATGGTGGATCAACGAAGTATAGTAGCTTTTGTCTTCTTTTCCGCCTTGCTGTTTCAGTTCACATTGCCACAGTTGGAGCCACTGAGTTCGCCGGCTGAAAAGGTTGCACTACTTCAACTCAGGTCCTCTCTGGGCTTGAGGAGCAGGGACTGGCCAATAAAGGCCGACCCCTGTTTACTATGGAATGGTATTTCGTGCCAAAATGGCACAGTAATTGGGATTAATATCTCCGGTTTTAGAAGAACAAGGATGGGTAGAGAAAACCCACAATTTGCTGTCGACTCCTTGGCCAATCTAACGAACTTGGAGGCTTTCAATGCCTCAAGGTTCTTGCTTCCCGGTCCTATTCCTGACTGGTTTGGACTAAGCCTGCCCCAACTTCAAGCGCTCGACCTTCGGTCTTGCTCTGTCAATGGTGCTATTCCTTCAAGTCTTGGCAATTTAACAAATCTGACTGGTCTGTATCTGTCTCGGAATAGCCTAACTGGGGCAATTCCTACTAGTCTGGGTCAGTTGCTACGCCTCTCAGTTCTTGATCTCTCACAGAATTCGCTTACTGGATCCATACCTTCATCATTTGTATCCCTCGGGAATCTTTCGTCTCTGGACATTTCGACCAATTACATATCAGGTTCAATCCCTCCGGGTATTGGGACCCTACAGAAGTTGCAGTATTTGAATCTTTCCAACAATGATATAACATCTGCAATACCTGCCCAGATGGGGGATCTTAGTAGCTTGGTTGACCTTGATCTCAGTGTTAATTCGCTGTCTGGTTCAGTTCCACCTGATTTAAGAGGAATGAGGAGCTTGCGCAGAATGTTTCTAGGGAATAACGTGCTAGTTGGGTCTTTACCTGAGAACCTGTTCCATTCTACTTCGCAGTTGCAATCCATTGTTCTAAGATATAACAATTTCACTGGGGGTTTGCCTGATGTGCTATGGTCATTGCCTTCATTGAGCTTTCTGGATATCTCCGGCAACCAGTTCAGTGGTATGCTTCCAAATTCCACTGTTGATAAAAATGTCTCTGCTGTTGTTCTGAATATTTCTCGAAATTCATTCTATGGAGGACTCACACCCGTCCTAGCAAGGTTTGGTTCAGTAGATCTCTACGGCAATTATTTTGAGGGTGTCATCCCATCATTCGTGCCTAAGGATGCATCTCTTGATGTTAACTGTCTCCAAAATGTGTCCAAGCAGAGAACAGCAACAGAATGTGCTTCATTTTATGCTGATCACGGTCTAATTTTTGATAATTTTGGACGTCCAAATTCAGCGCAACCCCCTGAGCCAAGAAAATCCCGGAAGAGTAACAGAAAGACTATTATATTAGCTGCAGTGTTAGGCGGAGTAGGTCTAATAGCACTTGTGGTATTGTTGATATTATTGCTGCTCCTATGTGTTCGTACGAGGGGGGGCCACAATCGAAGAGAGGGTGGTGTAGGACCAGCACCTGCTGGAGGAAGTACACAAGCTCCTAGTGTCTCAATTAACTTCTCAACTCTAGGTGATTCATTTACATATCAGTTACTTCTCCAGGCCACTGGTGACTTCAATAATTCAAATTTGATTAAAAATGGCCACTCAGGAGATCTCTACAGGGGTTTGTTGGAGAATGGAGTCCCTATAGTTGTCAAAAGAATTGATTTGCGTTTGATCAGAAAAGAATCTTATCTAATGGAATTGGAGTTTTTCAGTAAAGTTTCTCATCCAAGAATAGTCCCTCTGTTGGGTTATTGTTTGGATAATGAGAATGAAAAGTTCCTGGTTTACAAATACGTGCCAAATGGAGACTTGTCCAATTGCTTACACCGAAAAAGCACTTCAGATGATGGAACTTTACAGTCACTGGATTGGATAACAAGGTTGAAAATAGCATTAGGAGCTGCAGAGGGCCTATCTTACTTGCATCATGAGTGCACTCCACCATTTGTGCACAGAGATGTGCAGGCTAGCAGTATTCTTCTTGATGATAAATATGAAGTGCGTTTGGGGAGCCTAAATGAAGTCTGTGTTCAAGAAGGGGGAATTCATCAAAGCAGAATTACTAGATTACTACGTTTACCCCAGTCATCTGAACAAAGTACATCCGGCGCTGCGTTGTCCATTTGTGCTTATGATGTTTACTGCTTTGGGAAGGTATTACTTGAACTGATAACTGGCAAGCTGGGAGTCAGTGCTACCAGTGATACTGAACTAAAGGAATGGCTGGAACAGACACTTCAATACATCAATATCTATGACAAGGAGTTGGTGACAAAAATTGTTGACCCTACTATGATTGTTGATGAAGATCTTTTGGAAGAAGTATGGGCAATTGCCATTGTTGCCAGGTCCTGTCTTAATCCCAAGCCATCAAAACGGCCAATAATGAGATATGTCCTTAAGGCCTTGGAAAACCCTTTGAAGGTAGTAAGGGAAGAAAACTCTGGTTCTGCACGTCTGAGGACTACATCCTCCAGAGCTTCTTGGAATGCTGCTTTGTTTGGTAGTTGGCGTCAAAGCTCCCCGGATGTCACAATCATTCCAGCAGCCTCCGGCATTAAAGCTGAAGGAGCCAGTAGTTTCAAAAATTCTGGAACAACAGGCTCACAGGGTAGTTTCCATAATGGGGTAGGTGAATTTTCATCCTCGCGCCGGCGGCATTCAAAAGATATTTTCCCAGAACCATCTAATGTTCACGATGGATAG 2694 0.4369 MVDQRSIVAFVFFSALLFQFTLPQLEPLSSPAEKVALLQLRSSLGLRSRDWPIKADPCLLWNGISCQNGTVIGINISGFRRTRMGRENPQFAVDSLANLTNLEAFNASRFLLPGPIPDWFGLSLPQLQALDLRSCSVNGAIPSSLGNLTNLTGLYLSRNSLTGAIPTSLGQLLRLSVLDLSQNSLTGSIPSSFVSLGNLSSLDISTNYISGSIPPGIGTLQKLQYLNLSNNDITSAIPAQMGDLSSLVDLDLSVNSLSGSVPPDLRGMRSLRRMFLGNNVLVGSLPENLFHSTSQLQSIVLRYNNFTGGLPDVLWSLPSLSFLDISGNQFSGMLPNSTVDKNVSAVVLNISRNSFYGGLTPVLARFGSVDLYGNYFEGVIPSFVPKDASLDVNCLQNVSKQRTATECASFYADHGLIFDNFGRPNSAQPPEPRKSRKSNRKTIILAAVLGGVGLIALVVLLILLLLLCVRTRGGHNRREGGVGPAPAGGSTQAPSVSINFSTLGDSFTYQLLLQATGDFNNSNLIKNGHSGDLYRGLLENGVPIVVKRIDLRLIRKESYLMELEFFSKVSHPRIVPLLGYCLDNENEKFLVYKYVPNGDLSNCLHRKSTSDDGTLQSLDWITRLKIALGAAEGLSYLHHECTPPFVHRDVQASSILLDDKYEVRLGSLNEVCVQEGGIHQSRITRLLRLPQSSEQSTSGAALSICAYDVYCFGKVLLELITGKLGVSATSDTELKEWLEQTLQYINIYDKELVTKIVDPTMIVDEDLLEEVWAIAIVARSCLNPKPSKRPIMRYVLKALENPLKVVREENSGSARLRTTSSRASWNAALFGSWRQSSPDVTIIPAASGIKAEGASSFKNSGTTGSQGSFHNGVGEFSSSRRRHSKDIFPEPSNVHDG* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01507 897 PRINTS Leucine-rich repeat signature 175 188 - -
Pte9g01507 897 PRINTS Leucine-rich repeat signature 220 233 - -
Pte9g01507 897 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 30 189 - -
Pte9g01507 897 Gene3D Ribonuclease Inhibitor 188 290 IPR032675 -
Pte9g01507 897 Gene3D Ribonuclease Inhibitor 32 187 IPR032675 -
Pte9g01507 897 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 168 263 IPR046959 -
Pte9g01507 897 Gene3D Phosphorylase Kinase; domain 1 490 594 - -
Pte9g01507 897 FunFam Putative LRR receptor-like serine/threonine-protein kinase 595 819 - -
Pte9g01507 897 FunFam Leucine-rich repeat receptor protein kinase EMS1 190 288 - -
Pte9g01507 897 SUPERFAMILY Protein kinase-like (PK-like) 495 799 IPR011009 -
Pte9g01507 897 MobiDBLite consensus disorder prediction 853 875 - -
Pte9g01507 897 Pfam Protein tyrosine and serine/threonine kinase 523 797 IPR001245 GO:0004672|GO:0006468
Pte9g01507 897 FunFam Predicted protein 489 594 - -
Pte9g01507 897 ProSiteProfiles Protein kinase domain profile. 519 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01507 897 SUPERFAMILY RNI-like 93 378 - -
Pte9g01507 897 SMART LRR_typ_2 196 218 IPR003591 -
Pte9g01507 897 SMART LRR_typ_2 268 292 IPR003591 -
Pte9g01507 897 SMART LRR_typ_2 148 171 IPR003591 -
Pte9g01507 897 SMART LRR_typ_2 172 195 IPR003591 -
Pte9g01507 897 SMART LRR_typ_2 220 244 IPR003591 -
Pte9g01507 897 SMART LRR_typ_2 317 340 IPR003591 -
Pte9g01507 897 Gene3D Transferase(Phosphotransferase) domain 1 595 820 - -
Pte9g01507 897 MobiDBLite consensus disorder prediction 853 897 - -
Pte9g01507 897 Gene3D Ribonuclease Inhibitor 291 407 IPR032675 -
Pte9g01507 897 MobiDBLite consensus disorder prediction 876 897 - -
Pte9g01507 897 Pfam Leucine rich repeat 269 330 IPR001611 GO:0005515
Pte9g01507 897 Pfam Leucine rich repeat 150 209 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01507 Pte-Chr9 36256939 36263597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01507 32 691 Miscellaneous Gene Families AT2G16250 58.797 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Pte9g01507 PK_Tyr_Ser-Thr 1.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01507 - - qsa:O6P43_011595 1264.21