Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01502 ATGTCCGCCAAGAAGAAGAGAAGAATGGGGAAAGAAACAACGTTTCTAGGTTTTGGAACTATTAGCAAACATCTCTTTTCCCTGTGCCCTCCTTCGATTGAGAATCCTCTGCCCTTCTCCCCCACTCTAAGTACAGCAGAAACACCACCATCCTCACCAGCAGATTCGTCACCACCGGCACCACCTTCTTCAGATAATGGATCATCATCATCTCCACCTCCGCAATCATCACCACCAACTGATAAAGTATCGGACTCTCTCCCACCTTCACCTTCTCCCCCGTCAGAATCATCACCACCATCCTCTTCTCCTTCACCTCCATCAGGATCAGCACCCCCATCAAACAACTCCTTCTCTTCACCTTCACCTTCAACACCGTCCGGTTCGACATTTTCCGCTCCTACACCTCCTGATAATGGTAGAAAGAACAATGCACCATCTCCGCAATCTCCATCATCTGGTTCTGGCGACAGCCCACCGGCACTGGGATCTAAAATGTCGCATTCAGTTGACGAGGATCCCTTGCCAACTGTAATAGCAATTTCAGCTGGTGGTGCTTTGTTGTTTGCATGCTTGGTTGCGCTCCTTGTTTGTTGCTTAAGAAAGCAGAAGAAGAAGTCGGAAGTTAATACATATATGACGGGTACCCCTGGAAAAGTGAACGATAATGGATACAATAGAGCTTCCCAAAAAAGGCCACATGGTGATCATTTTCTTAACATGCCACCGCCTCCGGGAGCAGCTCAACAACGTTGGCAAGCACATGCAGCGAATGGCGTGCCGTATTGGCAAGCACAGCCTTCACCTCCTGCTTTGCCAATTCAAAGCAGCGACTTGAGCAGTAGCAATTTCTCAGCCGCCTACGGCCCTCCAATGCCACCCCCACCTCCTTCTCTGGAACTTGGATTCAACAAAAGCACATTTACGTACGAAGAGTTATTAGCAGCAACGGGAGGGTTCGCCCAAGACAATATATTAGGTCAAGGAGGTTTTGGTTATGTCCACAAAGGTGTGTTACCAAATGGAAAGGAGATTGCAGTGAAGAGTCTCAAAGCTACAAGTGGACAAGGTGATCGTGAATTCCAAGCAGAGATTGATATCATTAGCCGTGTCCATCATCGTCACCTTGTATCACTTGTTGGTTATTGCATATCTGGAGAGAGGAAGTTGCTTGTTTATGAGTTTGTGCCCAACAAAACACTTGAATATCACCTCTACGAAAAGGGAACACCAGTCATGGATTGGCCAACTAGGCTCAAAATCGCCATGGGAGCAGCCAAGGGCCTTGCCTACTTGCATGAGGATTGTCATCCTCGCATAATTCATCGTGACATCAAAGCTGCAAATATTTTGCTCGAGCATAACTTTGATGCCAAGGTGGCTGATTTTGGATTGGCGAAGCTGAACCAAGACAACCACACTCATGTTTCTACTCGTGTTATGGGTACATTTGGGTATCTTGCACCGGAATATGCATCAAGTGGCAAGTTAACAGATAAATCTGATGTTTTCTCCTTTGGAATGATGCTCTTGGAGCTAATCACTGGACGACCACCTGTGGATGTCACGGGTCAATTTGAAGACAGTCTTGTAGATTGGGCTCGACCACTCTGTATACGTGCAATGGAGACCGGTGACTATGATGAGTTGGTGGATCCTCGTCTGGAGAATAATTATAATAAACACGAGATGTCATGCATGGTTGCTTGTGCTTCTGCAAGTATTAGGCATTCAGCAAGAAGACGACCAAAAATGAGCCAGATAATTCGTGCATTGGAAGGCGATATCTCTCTGGATAACTTGAATGAGGGGGTTAAACCTGGTCAGAGTTCAGTGTTCAGTACTGGTACTAATTCCGACTATGATGCTAGTTCATACAGTGCAGACATGAGGAAATTCAGAAAGTTAGCACTGAGTGAAGACGAAGTTAGCAGTGAGTATGCCCAGACCAGTGACTTCGGGTCCGACCCTTCGTTCAACTGCGGCAATGATTCAGCAGAAATGAGCAAAAGAGGAAGACAAGAAAAGTTCAACTTGTGA 2040 0.4642 MSAKKKRRMGKETTFLGFGTISKHLFSLCPPSIENPLPFSPTLSTAETPPSSPADSSPPAPPSSDNGSSSSPPPQSSPPTDKVSDSLPPSPSPPSESSPPSSSPSPPSGSAPPSNNSFSSPSPSTPSGSTFSAPTPPDNGRKNNAPSPQSPSSGSGDSPPALGSKMSHSVDEDPLPTVIAISAGGALLFACLVALLVCCLRKQKKKSEVNTYMTGTPGKVNDNGYNRASQKRPHGDHFLNMPPPPGAAQQRWQAHAANGVPYWQAQPSPPALPIQSSDLSSSNFSAAYGPPMPPPPPSLELGFNKSTFTYEELLAATGGFAQDNILGQGGFGYVHKGVLPNGKEIAVKSLKATSGQGDREFQAEIDIISRVHHRHLVSLVGYCISGERKLLVYEFVPNKTLEYHLYEKGTPVMDWPTRLKIAMGAAKGLAYLHEDCHPRIIHRDIKAANILLEHNFDAKVADFGLAKLNQDNHTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGMMLLELITGRPPVDVTGQFEDSLVDWARPLCIRAMETGDYDELVDPRLENNYNKHEMSCMVACASASIRHSARRRPKMSQIIRALEGDISLDNLNEGVKPGQSSVFSTGTNSDYDASSYSADMRKFRKLALSEDEVSSEYAQTSDFGSDPSFNCGNDSAEMSKRGRQEKFNL* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01502 679 MobiDBLite consensus disorder prediction 112 162 - -
Pte9g01502 679 Gene3D Transferase(Phosphotransferase) domain 1 396 604 - -
Pte9g01502 679 MobiDBLite consensus disorder prediction 646 679 - -
Pte9g01502 679 Gene3D Phosphorylase Kinase; domain 1 299 395 - -
Pte9g01502 679 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 186 638 IPR047117 -
Pte9g01502 679 CDD STKc_IRAK 326 594 - -
Pte9g01502 679 MobiDBLite consensus disorder prediction 26 169 - -
Pte9g01502 679 ProSiteProfiles Protein kinase domain profile. 320 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01502 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Pte9g01502 679 FunFam Proline-rich receptor-like protein kinase PERK1 396 603 - -
Pte9g01502 679 MobiDBLite consensus disorder prediction 646 667 - -
Pte9g01502 679 Pfam Protein tyrosine and serine/threonine kinase 323 591 IPR001245 GO:0004672|GO:0006468
Pte9g01502 679 SMART serkin_6 320 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01502 679 SUPERFAMILY Protein kinase-like (PK-like) 293 592 IPR011009 -
Pte9g01502 679 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Pte9g01502 679 MobiDBLite consensus disorder prediction 52 111 - -
Pte9g01502 679 FunFam proline-rich receptor-like protein kinase PERK1 298 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01502 Pte-Chr9 36131265 36135006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01502 304 647 Trihelix Transcription Factor Family AT5G38560 57.925 3.17e-142 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pte9g01502 PK_Tyr_Ser-Thr 3.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01502 - - thj:104822882 631.713