Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01458 ATGGAGAATATAACCGCGCAATTGAAGCGCGGGATCTCGCGCCAATTCTCGTCTGGGTCGTTCAGGAGAAATATGAGCCGTCAGTTCACGCGACAATCGTCGCTTGATCCGAGGAGGAACCATATGAGGTTCAGTTTTGGTCGGCAGTCGTCGCTGGACCCGATTCGACGGAGTCCTTCCCTTGACGATGCTGACTTGACGGTGCCAGACAATCTTGATTCCACCATGCAGTTGCTCTTCATGGCTTGCAGGGGTGACGTCAAGGGAGTTCAGGATTTGCTCGACGATGGGATTGATGTCAATAGTATTGATTTGGATGGTCGGACCGCCTTGCATATTGCTGCTTGTGAAGGCCATGTTGAGGTCGTCAAGCTCTTGCTGGTCCGAAAAGCCAATATTGATGCTCGGGATCGCTGGGGCAGTACGGCAGCAGCTGATGCCAAGTATTATGGAAATGTGGAGGTTTACAACACTCTCAAGGCTCGTGGAGCCAAAGTTCCGAAAACCAGGAAAACTCCAATGACAGTTGCAAATCCTAAAGAAGTTCCAGAGTACGAGCTAAATCCCTTGGAGCTTCAAGTCCGGAAGAGCGATGGTGACTTGAAGGGAATGTATAGGGTAGCCAAATGGAACGGTACGAAGGTTGTTGTAAAGATACTTGACAAGGATAGCTATTCCGATCCTGAAAGCATCGAAGCTTTCCTACAAGAGCTGACTTTATTAGAAAAGGTGCGGCACCCCAATGTAGTTCAATTTGTTGGAGCTGTTACGCAAAATAATCCTATGATGATTGTTTCGGAGTATCACAGCAAAGGTGATCTGGCAAGCTATCTTCAAAAGAAAGGTCGATTGTCTCCGTCAAAAGCTCTGAGATTTGCTCTCGATATTGCTAGGGGCACGAATTATCTGCATGAATGTAAACCAGATCCAATCATCCACTGTGATTTAAGGCCCAAAAACATTTTGTTGGATAATGGAGGGCAATTGAAGGTAACTGGATTTGGTATAGTGAAGTTGTCAAAAATTTCACCTGATAAAGCGAAGCTTGCACGACCAGTCACAAACATTGACCTTTCAAGCTTGTATGTAGCACCAGAGATGTACAATGATGAAATATTTGATAGAAGTGTGGATGCATATTCATTTGGTCTTATTTTATATGAGATGATAGAGGGTATAGCTCCCTTCCATCCCAAGTCTTCTGAAGAAGCTTTGAAAATATTGTGCGTAGAACGGAAAAGACCACCATTTAAGGTCAAAACAAAAAGTTATCCTCCAGATCTAAGAGCGCTAATTAGTGAATGCTGGGATCCTGAACCTGTTGTGAGGCCAACTTTCTCTGAGATTATAGTACGTTTGGACAAAATAGTTGCCAACTGCTCGAAGCAAGGGTGGTGGAAGGACACTTTCAAGCTTCCTTGGCAGGGTGCGGAGGTTGCCCACCGCACTCGGCTCACGTACCTTAGCCTTGAATCAGGGGTGCGCAAGGGATGCAGGGGCAATAGCCTCCGCAATATGATACCAGATACATGA 1533 0.4592 MENITAQLKRGISRQFSSGSFRRNMSRQFTRQSSLDPRRNHMRFSFGRQSSLDPIRRSPSLDDADLTVPDNLDSTMQLLFMACRGDVKGVQDLLDDGIDVNSIDLDGRTALHIAACEGHVEVVKLLLVRKANIDARDRWGSTAAADAKYYGNVEVYNTLKARGAKVPKTRKTPMTVANPKEVPEYELNPLELQVRKSDGDLKGMYRVAKWNGTKVVVKILDKDSYSDPESIEAFLQELTLLEKVRHPNVVQFVGAVTQNNPMMIVSEYHSKGDLASYLQKKGRLSPSKALRFALDIARGTNYLHECKPDPIIHCDLRPKNILLDNGGQLKVTGFGIVKLSKISPDKAKLARPVTNIDLSSLYVAPEMYNDEIFDRSVDAYSFGLILYEMIEGIAPFHPKSSEEALKILCVERKRPPFKVKTKSYPPDLRALISECWDPEPVVRPTFSEIIVRLDKIVANCSKQGWWKDTFKLPWQGAEVAHRTRLTYLSLESGVRKGCRGNSLRNMIPDT* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01458 510 PRINTS Tyrosine kinase catalytic domain signature 266 279 IPR001245 GO:0004672|GO:0006468
Pte9g01458 510 PRINTS Tyrosine kinase catalytic domain signature 424 446 IPR001245 GO:0004672|GO:0006468
Pte9g01458 510 PRINTS Tyrosine kinase catalytic domain signature 377 399 IPR001245 GO:0004672|GO:0006468
Pte9g01458 510 PRINTS Tyrosine kinase catalytic domain signature 305 323 IPR001245 GO:0004672|GO:0006468
Pte9g01458 510 FunFam Integrin-linked protein kinase family 270 469 - -
Pte9g01458 510 PIRSF ILK 8 474 - -
Pte9g01458 510 FunFam serine/threonine-protein kinase STY46-like 187 270 - -
Pte9g01458 510 Gene3D Transferase(Phosphotransferase) domain 1 197 478 - -
Pte9g01458 510 ProSitePatterns Tyrosine protein kinases specific active-site signature. 311 323 IPR008266 GO:0004672|GO:0006468
Pte9g01458 510 ProSiteProfiles Protein kinase domain profile. 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01458 510 ProSiteProfiles Ankyrin repeat profile. 106 138 IPR002110 GO:0005515
Pte9g01458 510 ProSiteProfiles Ankyrin repeat region circular profile. 106 138 - -
Pte9g01458 510 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 165 456 - -
Pte9g01458 510 Gene3D - 53 186 IPR036770 -
Pte9g01458 510 SMART ANK_2a 74 102 IPR002110 GO:0005515
Pte9g01458 510 SMART ANK_2a 139 168 IPR002110 GO:0005515
Pte9g01458 510 SMART ANK_2a 106 135 IPR002110 GO:0005515
Pte9g01458 510 Pfam Protein tyrosine and serine/threonine kinase 207 452 IPR001245 GO:0004672|GO:0006468
Pte9g01458 510 FunFam Integrin-linked protein kinase 1 47 185 - -
Pte9g01458 510 SUPERFAMILY Ankyrin repeat 65 175 IPR036770 -
Pte9g01458 510 SUPERFAMILY Protein kinase-like (PK-like) 207 453 IPR011009 -
Pte9g01458 510 Pfam Ankyrin repeats (3 copies) 80 166 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01458 Pte-Chr9 35712341 35717869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01458 1 474 MAP Kinase Kinase Kinase AT2G43850 77.824 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Pte9g01458 PK_Tyr_Ser-Thr 3.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01458 - - qsa:O6P43_028049 837.41