Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01422 ATGAAGCAGGACAAGTTTGATGATGGTCAGAAACTTAAAAGTAGTGTGAAACGGAAGTGGGAAATGCTGGAGCATTCTTATGAAAATGTGAAGAGTCAGCCTTCTGTCATAGATATAGCAGAAAAGCTTCAAGCAAGCCTTTCTGCTGAATTCCCAAGCTTTCTTAAGTCTATGCATCCATCAAATGTTTCTACTGGCTTTTATCTGAAGCTGCCAAAGACATTCTGTGACCTGTATATGCCGCAGCACGATGAAACAATGATCTTGATTGATGAAAGTGGAGAAGAATATGAAACTAAGTTCCTTGCAGAAAGGAAATCACTTTCAGGTGGATGGAGAAGATTCTCTTGTCTAAAAAAGTTATTTGTAGGTGATGTTCTAGTGTTCCATTTGATCAAACCTTCTAAGTTCATGGTCTACATTGTGAGAGCAAATAGTACTGCTGAAGTGGATGTGGCTCTCAGTCTTCTTAGTCTAAGCGCCAATGCCAATAGACCTACGTTGGGGAAGGGGTGGAGAGAGGAATGGAGTGGGTCTTCTTAA 543 0.407 MKQDKFDDGQKLKSSVKRKWEMLEHSYENVKSQPSVIDIAEKLQASLSAEFPSFLKSMHPSNVSTGFYLKLPKTFCDLYMPQHDETMILIDESGEEYETKFLAERKSLSGGWRRFSCLKKLFVGDVLVFHLIKPSKFMVYIVRANSTAEVDVALSLLSLSANANRPTLGKGWREEWSGSS* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01422 180 ProSiteProfiles B3 DNA-binding domain profile. 54 145 IPR003340 GO:0003677
Pte9g01422 180 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 36 147 IPR044837 -
Pte9g01422 180 CDD B3_DNA 52 143 IPR003340 GO:0003677
Pte9g01422 180 Pfam B3 DNA binding domain 54 144 IPR003340 GO:0003677
Pte9g01422 180 SUPERFAMILY DNA-binding pseudobarrel domain 47 145 IPR015300 -
Pte9g01422 180 Gene3D - 35 147 IPR015300 -
Pte9g01422 180 SMART B3_2 54 145 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01422 Pte-Chr9 35346510 35350083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01422 21 151 B3 DNA Binding Superfamily AT3G19184 45.038 1.19e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte9g01422 B3 8.2e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01422 - - dzi:111308279 149.828