Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01414 ATGTCTTCTTCTTCTTCCTCCCCCTCATCAAAAAAGTCTCGAATCAACGCAGTTGCTACGAGCTGCAGCACCTTCTTACCCAAGTTTCCAGTTACGTCGTTCCCTCATCTTTCACGCGGACAAGAGTTCTCCATCATGGTATCTACTCTTACCAACGTTGTTTCTGGTGCTACAGTGGCTTCATCAAGTAATGACATTTCTAGAGAGCTTTGGGTGCCAGTGACGCACACACCTACCTCTACTGCCTCAACCAGTACGGGGCAGATCATGACGTCGGATACGGTTCAAACCTGTGGTGAATGCAACTATGAAGGCTGTCTTGGGTGTACCTTCTTCAAAGACGAAAACAAGAGCGGTGTGAAAAGTAAAATCTCTGAGAATAAGCAGAAGAGGAATAAGAAGAAATACAGGGGAGTGAGACAGAGGCCATGGGGTAAATGGGCATCTGAGATACGAGACCCTATACGAGCTACGAGGCTCTGGCTTGGGACGTTTCGCACTGCTGAGGAAGCTGCTAGAGCGTATGATAAGAAAGCCATTGAATTCCGAGGGCCAAGAGCGAAGCTTAATTTTCCATTTATCGATTACACAGCAGAGGCAGAGGCAGAGCCACAAACACAAGCAGAGCCAACCGTGGCAGTCGAGCAAGTGACGTCTCAGAATGATCAGATAAAGTACGAAGATTTCCCAAAGGGAGTAATGGATAATGCAGTAAACGAGATGAATGCTGATACTGATTTCTGGGATTTGATGAATATTGATAATGAATTACAGAAGATGATGGAGTTTGCTGTGAATTCTTCAGACTCGACACATGGGAGTTGTTGA 828 0.4589 MSSSSSSPSSKKSRINAVATSCSTFLPKFPVTSFPHLSRGQEFSIMVSTLTNVVSGATVASSSNDISRELWVPVTHTPTSTASTSTGQIMTSDTVQTCGECNYEGCLGCTFFKDENKSGVKSKISENKQKRNKKKYRGVRQRPWGKWASEIRDPIRATRLWLGTFRTAEEAARAYDKKAIEFRGPRAKLNFPFIDYTAEAEAEPQTQAEPTVAVEQVTSQNDQIKYEDFPKGVMDNAVNEMNADTDFWDLMNIDNELQKMMEFAVNSSDSTHGSC* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01414 275 SMART rav1_2 135 198 IPR001471 GO:0003700|GO:0006355
Pte9g01414 275 PANTHER DNA-BINDING DOMAIN 88 219 IPR044808 GO:0003700|GO:0009873
Pte9g01414 275 Pfam AP2 domain 135 184 IPR001471 GO:0003700|GO:0006355
Pte9g01414 275 FunFam Ethylene-responsive transcription factor 2 134 193 - -
Pte9g01414 275 CDD AP2 134 192 IPR001471 GO:0003700|GO:0006355
Pte9g01414 275 Gene3D AP2/ERF domain 134 193 IPR036955 GO:0003700|GO:0006355
Pte9g01414 275 PRINTS Ethylene responsive element binding protein signature 136 147 IPR001471 GO:0003700|GO:0006355
Pte9g01414 275 PRINTS Ethylene responsive element binding protein signature 158 174 IPR001471 GO:0003700|GO:0006355
Pte9g01414 275 ProSiteProfiles AP2/ERF domain profile. 135 192 IPR001471 GO:0003700|GO:0006355
Pte9g01414 275 SUPERFAMILY DNA-binding domain 135 193 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01414 Pte-Chr9 35307797 35308997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01414 36 198 AP2-EREBP Transcription Factor Family AT4G34410 42.268 6.67e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte9g01414 AP2 7.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01414 - - qsa:O6P43_011716 216.853