Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01401 ATGCTTCCTAGAAGCCGTGTCTTCCGGTATCCTTCTGGCCGTGGTATGCCAGATGTACCAGTGCCTGGTGTCGGAGGCATGTTTTCTGTCCCATATGACATGGGTGGTGTGCCCCTTCGTGAGGCTGCAATTCCTCAGCAGATTCCAATTGGTGCTTTGGCTTCTGCTCTGGCAAATGCTTCTCCAGAGCAGCAGAGAACAATGCTGGGTGAGAGTCTCTACCCATTGGTAGAACAGCTTGAACCTGATAATGCAGCGAAAGTGACTGGTATGCTCCTAGAGATGGATCAGCCCGAGGTTCTTCACCTGCTCGAGTCACCTGAAGCATTGAAAGCCAAGGTCGGAGAGGCAATGGATGTCCTCAGGAACGTTGCACAGCAGCAGCAGCAGACTGCTGACCAGTTGGCCTCATTATCACTTAACGAGAACCTTGTCTCTTGA 441 0.5193 MLPRSRVFRYPSGRGMPDVPVPGVGGMFSVPYDMGGVPLREAAIPQQIPIGALASALANASPEQQRTMLGESLYPLVEQLEPDNAAKVTGMLLEMDQPEVLHLLESPEALKAKVGEAMDVLRNVAQQQQQTADQLASLSLNENLVS* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01401 146 SMART poly_2 61 124 IPR002004 GO:0003723
Pte9g01401 146 Gene3D - 44 128 - -
Pte9g01401 146 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 49 126 IPR002004 GO:0003723
Pte9g01401 146 SUPERFAMILY PABC (PABP) domain 10 134 IPR036053 GO:0003723
Pte9g01401 146 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UBR5 61 142 - -
Pte9g01401 146 FunFam Polyadenylate-binding protein 45 127 - -
Pte9g01401 146 Pfam Poly-adenylate binding protein, unique domain 57 121 IPR002004 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01401 Pte-Chr9 35241667 35242654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01401 3 145 Eukaryotic Initiation Factors Gene Family AT1G49760 68.707 2.82e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01401 K13126 - gmx:100780329 233.802