Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01393 ATGAGCATTATCTGTTTCCAGTCCTCATTTTTGTTATCTGCATTTTTTCTTTTTCTGTATTTTCTGCATGAGGTGGCTGCTGCTAAAACGGTGGCAACATATAAAAGAGAAGCACTTGAAATCAGCATAGGTGGTGGCTCTGATGTGCCTCCCTCTGAATCACCTTCTTGCCCTCCACCACTTGTCTTTGAGAACAAGAGACTTGAGAATGTCTACACAGTGCTTCAAAACTTCAAAAACCAGATTACATGCGATCCCAACGGCTACACAGACACATGGGCTGGTTCTGATGTCTGCAACTATAAGGGGTTAAGTTGTGCAACCTTCCCCGGCACAAACGAGCGTGCAGTTTCAGGATACAACTTCAATCAAGCTGGTTTTGCTGGACCAAACCTCGACCTCTGTGGATTTGTGAACCAGTTACCAGATACAGTCTACTTCCACTTTAACTCCAACAACTTCACTGGTGCCGTCCCTTTCGATATTTCAAAGTTCATATACTTCTACGAGCTTGACCTCAGTAATAACAAGCTGAGCGGCGAGTTTCCAAAGGCAGTTCTTGCTTCAAAGAATCTGACTTTCATAGACCTCAGGTTCAACCAGTTTCATGGCACGGTTCCGAAAGAACTGTTTGAATTAGACGTCGATGTAATCTTTATCAACAACAACAACTTTGACCAATGTCTTCCTGATAACTTTGGCTCCACACCAGCTGTGTACATCACTGTTTCAAGCAACAACTTCGTCGGTCCAATCCCCAGAAGCGTTGGCAAGGCATCAAGACTGAAGGAGGTTTTGTTCTTGAACAACAGTTTCTCAGGATGCTTGCCTTATGAAATTGGTTGCCTCAGCAATACCACTGTTTTTGATGTAAGCATCAACAAGTTGACAGGGCCAATTCCACAGTCTTTTGCCTGCTTGGGGAAAATTCAGTACCTTAATTTGGGACAGAATTTGTTCTATGGACAAATTCCAGAACAGGTCTGCAAACTACCCAACCTGGTCAATCTGACCTTGTCAGGAAACTTTTTCAATTGGATTGGACCTGAGTGTGTGAAGCTCATAAAAAGAGGAGTGCTTGATGTAAAGAATAACTGCATTTCAGGTTTACCATATCAGAGATCCCCATATGAATGTCATATGTTTTATTCTAAGCCCAGGTATTGCTCAAACGCCAAGTCACTGAGTTATATCCCTTGTTGGAAACACTACGAGAGTTGGGAGAAGACATCAAATCCTTCTTCACCAGTGACATACAAAGCACTGACACCGTCCAATTCATGA 1284 0.4291 MSIICFQSSFLLSAFFLFLYFLHEVAAAKTVATYKREALEISIGGGSDVPPSESPSCPPPLVFENKRLENVYTVLQNFKNQITCDPNGYTDTWAGSDVCNYKGLSCATFPGTNERAVSGYNFNQAGFAGPNLDLCGFVNQLPDTVYFHFNSNNFTGAVPFDISKFIYFYELDLSNNKLSGEFPKAVLASKNLTFIDLRFNQFHGTVPKELFELDVDVIFINNNNFDQCLPDNFGSTPAVYITVSSNNFVGPIPRSVGKASRLKEVLFLNNSFSGCLPYEIGCLSNTTVFDVSINKLTGPIPQSFACLGKIQYLNLGQNLFYGQIPEQVCKLPNLVNLTLSGNFFNWIGPECVKLIKRGVLDVKNNCISGLPYQRSPYECHMFYSKPRYCSNAKSLSYIPCWKHYESWEKTSNPSSPVTYKALTPSNS* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01393 427 Gene3D Ribonuclease Inhibitor 238 398 IPR032675 -
Pte9g01393 427 Gene3D Ribonuclease Inhibitor 72 236 IPR032675 -
Pte9g01393 427 Pfam Leucine rich repeat N-terminal domain 74 106 IPR013210 -
Pte9g01393 427 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 20 409 - -
Pte9g01393 427 FunFam Leucine-rich repeat receptor protein kinase EMS1 229 327 - -
Pte9g01393 427 SUPERFAMILY L domain-like 71 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01393 Pte-Chr9 35210324 35212068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01393 53 386 Leucine-rich Repeat extension Gene Families AT3G24480 44.478 2.57e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01393 - - qsa:O6P43_011750 463.381