Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01388 ATGGAGGATATCAACTTGCAGGTGGACGTGGATCGGGTTAAGGGACCATGGAGTCCTGAAGAGGATGATTTGTTGAAGAAGCTCGTGCAACGTTACGGCCCTCGTAACTGGTCGGTCATTGCCAAGTCAATCTCAGGTCGCTCCGGAAAGTCTTGCAGACTTCGATGGTGTAACCAGCTATCTCCTAAGGTGGAGCACAGACCATTTAGCCACGAAGAGGACGATATCATCATCAAGGCTCATTCCATGTATGGTAACAGGTGGGCTACCATTGCTAGACTCCTCAATGGCAGAACAGACAACGCTGTGAAGAACCATTGGAACTCTACTCTTAAGAGAAAGTTCTCATCTTTAATCAGCGCCGACGAAGAAGCTGCCACCGCCGAGGAGTCGTCCTTGCATCCTAAGAAAAGATCTGCTGATCGTTTTTCCGTCAACGCGAGTCGCGGTTTCACTCCGGGCAGTTCCTCCGGATCGGATATCAGTGATTCCACTTTACCAATGATGTATTCGACCCAACATGAACCGACTCGACCTCTAGCATCCACTGCTATGTTTATACCACCGCCTTCACTACAAGCCGAGTCATGTTTGATTCAACAGAAAAGCCAACCCTCGACGATGCTAACTCTAGGCCTGCCTGGGACTGAACCAAATGAGTTTCAATCACCAAATCACAACCCACAGATTTCAAAAACTTTCCCTTCTTCCATGTTGTCATTGGGACCGGAGTTGCTGTCTGTGATGAAGGAGATGATAAGGGACGAAGTGAGAAACTACATGCCTGAACATGACGGAGACGGTGGTGGGTTGTGA 816 0.4877 MEDINLQVDVDRVKGPWSPEEDDLLKKLVQRYGPRNWSVIAKSISGRSGKSCRLRWCNQLSPKVEHRPFSHEEDDIIIKAHSMYGNRWATIARLLNGRTDNAVKNHWNSTLKRKFSSLISADEEAATAEESSLHPKKRSADRFSVNASRGFTPGSSSGSDISDSTLPMMYSTQHEPTRPLASTAMFIPPPSLQAESCLIQQKSQPSTMLTLGLPGTEPNEFQSPNHNPQISKTFPSSMLSLGPELLSVMKEMIRDEVRNYMPEHDGDGGGL* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01388 271 FunFam MYB transcription factor 14 65 - -
Pte9g01388 271 PANTHER MYB PROTEIN-RELATED 14 155 - -
Pte9g01388 271 MobiDBLite consensus disorder prediction 126 174 - -
Pte9g01388 271 SMART sant 65 113 IPR001005 -
Pte9g01388 271 SMART sant 13 62 IPR001005 -
Pte9g01388 271 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Pte9g01388 271 CDD SANT 68 111 IPR001005 -
Pte9g01388 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 115 IPR017930 -
Pte9g01388 271 Gene3D - 67 142 - -
Pte9g01388 271 Pfam Myb-like DNA-binding domain 14 60 IPR001005 -
Pte9g01388 271 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Pte9g01388 271 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Pte9g01388 271 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Pte9g01388 271 MobiDBLite consensus disorder prediction 145 174 - -
Pte9g01388 271 Gene3D - 13 65 - -
Pte9g01388 271 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Pte9g01388 271 CDD SANT 16 58 IPR001005 -
Pte9g01388 271 MobiDBLite consensus disorder prediction 127 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01388 Pte-Chr9 35139590 35140990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01388 9 263 MYB Transcription Factor Family AT4G37260 44.366 8.94e-73 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte9g01388 Myb_DNA-binding 3.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01388 K09422 - qsu:112035969 269.24