Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01371 ATGTTCCAAGGAAATGAAGCAACGGCTCATGAAATCAGTAATCATAATCAGTCAGGAGAGTGGTTGAACCTGACTTTAGGAGGTACAGTCCCCTACAATGGAGATGAGCCAAATTCACAACCAAAACCAGATCCCGTGAAGGTTTTCTCTTGCAACTTCTGTCTAAGAAAGTTCTTCAGCTCACAAGCACTAGGAGGTCATCAGAACGCTCATAAAAGGGAGAGAGGAGCAGCTCGAAGATTGCATTCTCACAGGATGATGACCATGATGGGTGGCTTACCGATGCACAGCCCCATGATTCGATCATTAGGAGTCAAGCCTCATTCACTCGTGCAGAAGTCTAGTAGAGATGGAAGTGGAATTAAAACAAGATTTAACAATGACGCCTTTGCAGGATTTGCCATGTCCTGGACACCTTTAACGGTGGATGACACAATGAATATAGGGTGGCCAAGCAGCTTTCATTTGGAGCCACAACAAGAAGAGACAAACTCAGGACCATCCAAGCTTGATTTAAACCTGCGACTCTAG 531 0.4501 MFQGNEATAHEISNHNQSGEWLNLTLGGTVPYNGDEPNSQPKPDPVKVFSCNFCLRKFFSSQALGGHQNAHKRERGAARRLHSHRMMTMMGGLPMHSPMIRSLGVKPHSLVQKSSRDGSGIKTRFNNDAFAGFAMSWTPLTVDDTMNIGWPSSFHLEPQQEETNSGPSKLDLNLRL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01371 176 MobiDBLite consensus disorder prediction 157 176 - -
Pte9g01371 176 Gene3D Classic Zinc Finger 38 91 - -
Pte9g01371 176 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 76 IPR013087 -
Pte9g01371 176 SUPERFAMILY beta-beta-alpha zinc fingers 47 75 IPR036236 -
Pte9g01371 176 PANTHER ZINC FINGER PROTEIN 4-LIKE 8 176 - -
Pte9g01371 176 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01371 Pte-Chr9 35039390 35040596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01371 3 173 C2H2 Transcription Factor Family AT1G24625 33.511 3.37e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01371 - - pop:7492073 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01371 9 35039390 35040596 Pte9g01371 9 35039390 35040596 RCT