Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01367 ATGGCAGATAATGTACGGACATATGTTTCTTCAGGTCCGAGTGTTACTCTTGCATGTCAAAACAAAATAAGACACGAGGAAAAGGAAGCATGCAGTGTGGAATGTGCGCAAGCACATTCTGAATTATTGGAACAAAAGGTTGGGTCTGAGTCTATTGGGACTGAGGAGGAACTTGGTAACTGTAAGGTATCAGGCTGTCTTGATGAAAAATTGCTTGAAGTAACTGCATCTAAGACCATGGATTTGAAGAACCAGCAGCTTCCTACTTGTCCAAACAATTCAGTAGAGAGTTGTTTAATCATAGAGAACTTAAGTTCTCAGCGGAATGACCAAGAGATAGCACGCGATTCAGAGCACACACAAACACATTCTGAATCACTGGAACACAAGCCTAAGATTGGGTCTGAGTGTCTTGGGACTGAGGACGAACTCTGCGATTGTAAGTTATCTGGCTCCGTTGATGAAAAATTGATACAGGGCACTGAAACGAAGATCATGGATGTCAATTCGAAGCAGCTCCCTACTCATCCAAACGATGCAGTAGGGAGTTCTTTAATCAAAGAGGACTTAGGTTCTCAGCAAAATGTGCCACAGCTGGAACCTGAAGTTGTCTCTGCATGTTTGTCTGGTCATAATGTGGAGAATTCATGCGGGCTTGCTAAGAATGTTCAAGATCCACCTGTAGAAGCTTTTGTTGCAGTAAAAATGGTTGAAGATGATTCACAACCATCTCCTGGAAGAGGAAATCGCAGTTCTAGTAATTTGAAATTGTTGCCAATTAATGAAGATGTCCCCAAAACCACAAGTTCTGAACAAGTTGTTCATGATCCAACTGTTGGAGCTTCTGGTCAAGTACCTGTTGAAGATGAATCACAACAATTTCCCAAAGGGGGAATGTGTAGTTCTAGTAATTCAAAATTGTTGACAACTGATGAAGATGTGCTGAAAACCACTAGTTCTGAACAGTTGTTTTGTAGTAATCAACCAATAATGCACTCTCTCGGAGATAAGGTCAACTGTGGTAGCTCCGAACCAGTGCTGTGTGGAAATGAACAGTCTGTGGCACCTTCTGAAAATGCTCTGAAATGTAATAGTTCTTTGTTTCTGTGTCCTTCTGAAGAACATCCTATCATTCATCCTGAAGATGCTGCCTGCCCCAATATTGAACAGTTGGGAGCACCATCTAGCTGTGCAAATCAGAGCCCTTATGGACGCAGGTCTAAGACAACTGCTAAACGATCGAAAAGGAAATATATGCTGCGATCTTCAGGAGGCAATGACAGACTTTTGCGCTCTAGGAATCATGAAAAATCAAAGGAACCTGAATCAAATACTAATACTGCTGCTAGTGTCAATAAAGGACATAAGAGGCAGAAGAGAAATAAAAAGAAGGGAAGAGGTGAGGAAGTTATTGATGACCAATACACAAAAATTAGGAAACGATTAAAATATTGGCTACATCGTATAAGCTACGAGCAGAGCTTTATTGATGCTTACTCTGGTGAAGGTTGGAAAGGACAGAGTGTTGAAAAGTTGAAGCCAGAAAAAGAACTACAAAGGGCAGCATCTGAAATACTTAGACGTAAATTAAAAATTAGAGATTTATTTCAGCATCTTGATTTGCTGTGTACTGAAGGAAGGTTTGCACAATCTTTATTTGATTCTGAAGGACAGATTGACAGTGAAGATATATTTTGTGCAAAGTGTGGATCAAAAGATCTGTCCTCTGATAATGACATAATACTATGCGATGGTGCTTGTGACCGAGGCTTTCATCAGTTCTGTTTGGAACCACCTTTGTTAAGTGAAAGCATTCCCCCTGGCGACGAGGGTTGGCTATGCCCTGGATGTGATTGTAAAGATGATTGCCTTGAACTTCTGAATGAATTCCAAGGGACAAATCTGGATGTTACTGACAGCTGGGAGAGAGTTTTCCCTGAGGCTGCATTAATAGCAGCTGGGAAAAATGTGGATCCCAACTTTGGGTTGCCTTCTGACGAGTATGATGATGGAGATTATAATCCCAATGCTCCAGAAGATGAGGATATTCTTGGGGGTGGATCAAGTTCTGATGATACTGAATATGCTTCTGCACCAGAGGACTTGGCAGCTTCTGGTAACCAAGATCCATACTCAGGCCTTCCTTCTGAGGATTCAGAGGATGATGACTATAATCCTAGTGCTCCAGGCATTGGAAAGAAGGACAAAGAGGAAGCTTCAAGCTCTGATTTTACATCTGACTCTGAGGATCTTGCTGCTGTAATTGAGGCTAATGGGACATCTGCGCAGGATGACAACACTAGCTCTGAAGTAGTCGCACCTGCTCAGGGTTCTGGCAGAAGGAAAACTAAAGTTGGACAAAAGACACGATCTTTTGTTGATGAGCTGTCATCTCTTTTAGAACCAGATCCTGGACAAGATGGTTGTGCTATCGTTTCTGGGAGAAGACATGTAGAAAGGTTGGACTATAAAAAACTGTATGATGAGGCATATTCTAATGCTGAGCATGAATCCAGTGATGATGAAGATTGGACTGACATTGCACCTAGGAGGATTACAAAATGTACTGAAATAGTTGCTGCAGTGTCACAAAATGGAAAATCTCCAATCTCAGTGCATAAATCAAAAGAAGCTCTGAATAAAGCAAATAGAAGAACAAATAGGAAGTCCAACTTTGAAGATGTAAACAGCTCACCTGCAAAACCAAATGAAGGCTCTTCTATATCGTGTTCAAGTGGTAAAAGGACTGGCTCCTCTTATAGAAGACTTGGAGAAGCTACCATACAGAGGCTCTACGAATCTTTTAGAGAAAATCAGTATCCTGACCGTGCTACAAAGGATAGCCTGGCTGAAGAGCTTGGGCTTAAATTTCAACAGGTTAGCAAATGGTTTGAAAATTATCGTTGGAGCTTTCGCCATTATGGAAAAGCTCCTTCGCAGCTGCCCACAGGCAACACTCCTTCAAATGGAGAAGCCGGAAAGGATACAACTTTACTGGATCGTTGCCGTGAGGATGCTAAAAACGGTCACTTGTCCCAGGAATGCAATAAAGAAGGATCTTCATGTCTAAACAGTAGAAAGAGAAAACGCGTATCAGATCCCTTGCCATCTGACTCCAACCATGATGTTGGTGAATCACCATCAAAGCCTCGTGTGAAGTCAACTGTAATTAATAAAGTGAAGAAAAATGGCAGGATTAAAAGACGGAGAAAAAGATGA 3219 0.416 MADNVRTYVSSGPSVTLACQNKIRHEEKEACSVECAQAHSELLEQKVGSESIGTEEELGNCKVSGCLDEKLLEVTASKTMDLKNQQLPTCPNNSVESCLIIENLSSQRNDQEIARDSEHTQTHSESLEHKPKIGSECLGTEDELCDCKLSGSVDEKLIQGTETKIMDVNSKQLPTHPNDAVGSSLIKEDLGSQQNVPQLEPEVVSACLSGHNVENSCGLAKNVQDPPVEAFVAVKMVEDDSQPSPGRGNRSSSNLKLLPINEDVPKTTSSEQVVHDPTVGASGQVPVEDESQQFPKGGMCSSSNSKLLTTDEDVLKTTSSEQLFCSNQPIMHSLGDKVNCGSSEPVLCGNEQSVAPSENALKCNSSLFLCPSEEHPIIHPEDAACPNIEQLGAPSSCANQSPYGRRSKTTAKRSKRKYMLRSSGGNDRLLRSRNHEKSKEPESNTNTAASVNKGHKRQKRNKKKGRGEEVIDDQYTKIRKRLKYWLHRISYEQSFIDAYSGEGWKGQSVEKLKPEKELQRAASEILRRKLKIRDLFQHLDLLCTEGRFAQSLFDSEGQIDSEDIFCAKCGSKDLSSDNDIILCDGACDRGFHQFCLEPPLLSESIPPGDEGWLCPGCDCKDDCLELLNEFQGTNLDVTDSWERVFPEAALIAAGKNVDPNFGLPSDEYDDGDYNPNAPEDEDILGGGSSSDDTEYASAPEDLAASGNQDPYSGLPSEDSEDDDYNPSAPGIGKKDKEEASSSDFTSDSEDLAAVIEANGTSAQDDNTSSEVVAPAQGSGRRKTKVGQKTRSFVDELSSLLEPDPGQDGCAIVSGRRHVERLDYKKLYDEAYSNAEHESSDDEDWTDIAPRRITKCTEIVAAVSQNGKSPISVHKSKEALNKANRRTNRKSNFEDVNSSPAKPNEGSSISCSSGKRTGSSYRRLGEATIQRLYESFRENQYPDRATKDSLAEELGLKFQQVSKWFENYRWSFRHYGKAPSQLPTGNTPSNGEAGKDTTLLDRCREDAKNGHLSQECNKEGSSCLNSRKRKRVSDPLPSDSNHDVGESPSKPRVKSTVINKVKKNGRIKRRRKR* 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01367 1072 MobiDBLite consensus disorder prediction 759 774 - -
Pte9g01367 1072 Pfam PHD-finger 565 620 IPR019787 -
Pte9g01367 1072 MobiDBLite consensus disorder prediction 892 917 - -
Pte9g01367 1072 MobiDBLite consensus disorder prediction 877 891 - -
Pte9g01367 1072 SMART HOX_1 917 978 IPR001356 GO:0003677
Pte9g01367 1072 CDD homeodomain 921 973 IPR001356 GO:0003677
Pte9g01367 1072 Gene3D - 916 980 - -
Pte9g01367 1072 CDD PHD_PRHA_like 565 617 IPR045876 -
Pte9g01367 1072 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 548 618 IPR013083 -
Pte9g01367 1072 MobiDBLite consensus disorder prediction 396 468 - -
Pte9g01367 1072 Pfam Homeodomain 924 969 IPR001356 GO:0003677
Pte9g01367 1072 SUPERFAMILY FYVE/PHD zinc finger 555 623 IPR011011 -
Pte9g01367 1072 MobiDBLite consensus disorder prediction 109 133 - -
Pte9g01367 1072 SUPERFAMILY Homeodomain-like 914 977 IPR009057 -
Pte9g01367 1072 ProSiteProfiles Zinc finger PHD-type profile. 563 620 IPR019787 -
Pte9g01367 1072 MobiDBLite consensus disorder prediction 1005 1072 - -
Pte9g01367 1072 MobiDBLite consensus disorder prediction 866 917 - -
Pte9g01367 1072 SMART PHD_3 565 618 IPR001965 -
Pte9g01367 1072 ProSitePatterns Zinc finger PHD-type signature. 566 617 IPR019786 -
Pte9g01367 1072 MobiDBLite consensus disorder prediction 428 442 - -
Pte9g01367 1072 FunFam Homeobox protein HAT3.1 546 625 - -
Pte9g01367 1072 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 403 1017 - -
Pte9g01367 1072 MobiDBLite consensus disorder prediction 659 789 - -
Pte9g01367 1072 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Pte9g01367 1072 MobiDBLite consensus disorder prediction 244 258 - -
Pte9g01367 1072 ProSiteProfiles 'Homeobox' domain profile. 914 974 IPR001356 GO:0003677
Pte9g01367 1072 MobiDBLite consensus disorder prediction 727 743 - -
Pte9g01367 1072 MobiDBLite consensus disorder prediction 1021 1036 - -
Pte9g01367 1072 MobiDBLite consensus disorder prediction 1055 1072 - -
Pte9g01367 1072 MobiDBLite consensus disorder prediction 239 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01367 Pte-Chr9 35016759 35025140 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01367 421 971 Homeobox Transcription Factor Family AT3G19510 46.886 5.01e-136 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Pte9g01367 PHD 5.6e-11 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01367 - - qsa:O6P43_011785 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01367 9 35016759 35025140 Pte9g01367 9 35016759 35025140 RCT