Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01359 ATGACGAGTGCTTCAGAGCTTTTCTACAATAGAAGGTATCGCTTCGGTCGGAACACCGATGGGTTAGGTTTGGATTCTTCACAAGATCGAAGCACTCTCCATCCGTATTCCAACAATCGTCGCCATCATCAGCAGCAAGGTCATAGTAACCGCCAAGATGCAGTGGGGGACGGAGCTGATTCTACACGACGTTCCTCATCTATCCGCCAGCACTGCCACCGCACTTCACACACTGACCATGGATCTGCTCGATTTGGCCAAGTTTCTAGCCGCTCTCCCATGGGCAGCAGTGCACATGCTGAAAATTCAAGCAATAGAAGCAGTCCAATATTGACAGCAAATGACAGATTACCTGGAACTGTCCTACTTGCAAGAGCAAGACTTCTTGAGAGATTAAGAGGCGTGTCTTCTTCTGGAAATAGTATTCTGTTCAGGCGAAATGTTAGAGCTCCACCGGGCATGGAAGACTTGAGGCGTGTTGGTTCTGGGGAGTGGGTGACTGAAATATCACCTAGTTTTGTGAGGGGATCCACAAGTACCGAATGGAGCTCCAATGTAGAAAGGATGCACTTATTTATGCAGGAAGTGACAAAAAGCCCGCCTGGACTAACCCAGGAAGCCATGGACTCCTTGCAATTGGAAGTTTTTAGCAGCAGCATGACTAAAATTGATGGATTGGAGTCTAGAGTATTACAGGATTGTAGCATATGTTTGGAGAATTTCAAGGACGGCGAGGAACTAATACGATTGCCGTGTGACCATAGATTCCACTCTGCTTGCTTAAATCCCTGGCTTCGCTGTAGTGGTGATTGTCCTTATTGTCGAAGAGCTATATGTAGAAAGTAG 846 0.4693 MTSASELFYNRRYRFGRNTDGLGLDSSQDRSTLHPYSNNRRHHQQQGHSNRQDAVGDGADSTRRSSSIRQHCHRTSHTDHGSARFGQVSSRSPMGSSAHAENSSNRSSPILTANDRLPGTVLLARARLLERLRGVSSSGNSILFRRNVRAPPGMEDLRRVGSGEWVTEISPSFVRGSTSTEWSSNVERMHLFMQEVTKSPPGLTQEAMDSLQLEVFSSSMTKIDGLESRVLQDCSICLENFKDGEELIRLPCDHRFHSACLNPWLRCSGDCPYCRRAICRK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01359 281 MobiDBLite consensus disorder prediction 21 63 - -
Pte9g01359 281 MobiDBLite consensus disorder prediction 81 113 - -
Pte9g01359 281 MobiDBLite consensus disorder prediction 16 113 - -
Pte9g01359 281 PANTHER SI:CH211-59O9.10 28 279 - -
Pte9g01359 281 CDD RING-H2_PA-TM-RING 233 275 - -
Pte9g01359 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 279 IPR013083 -
Pte9g01359 281 Pfam Ring finger domain 233 275 IPR001841 -
Pte9g01359 281 SUPERFAMILY RING/U-box 233 279 - -
Pte9g01359 281 SMART ring_2 234 274 IPR001841 -
Pte9g01359 281 MobiDBLite consensus disorder prediction 64 80 - -
Pte9g01359 281 ProSiteProfiles Zinc finger RING-type profile. 234 275 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01359 Pte-Chr9 34963538 34966787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01359 1 282 C3H Transcription Factor Family AT1G49850 39.223 1.67e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01359 - - qsa:O6P43_011795 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01359 9 34963538 34966787 Pte9g01359 9 34963538 34966787 RCT