Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte9g01353 | ATGGCTTTGCAGACTTTGAATTCACCAACTGCGCCAGCTCCTTTCAATATATATGGAGATGAAGAAGATGTGGAGCTCCATGCACTTGAGTCATGGGCTAAAAGAAAGCGCACGAGACGACCGCTTATTGAAAACCCACCTACAGAGGAAGAGTACTTGGCTCTTTGTCTCATCATGCTTGCTCAAAGTGGCAGCAACAACAGTAGCAACAACAAGAGCTCTGTCGTCCAGTTCCGTGAAGTACAGGAACCGCCGTCGCGGCCCCCTTTGAGATTGTCTTACAAGTGTAGTGTATGCAGCAAGGCCTTCCCGTCGTATCAAGCACTTGGCGGACACAAGGCGAGTCACCGGAAGTCGTCTTCTCCATCTGAAGCTAACAACGCTTCCACTTCCACCACCACTACGAGTATTGCAGCAGTGACGACTACCTCCGCTGGAAGTGGTAGAGCGCACGAGTGTTCTATTTGTCACAAGAGTTTTCCGACGGGGCAAGCCCTTGGGGGTCACAAGAGGTGTCACTACGACGGTGGCAACAACAGCAGTATTGCTGTGACATCATCGGAAGGTGGGGTGTCTACGTCAAATTTTCATGGCCACCGTGGGTTTGACTTGAACCTGCCAGCTCCATTGCCAGAAGTACTGTGGCCAGTGATGGGCAGGGACAAGGGAAAAAATTCAAGTAAATTTTCTGAGGAACAAGAGGTGGAGAGTCCTTTACAATTTGCCAAGAAGGCTCGTCTACTGCTGAGTAAAACGTAG | 759 | 0.5007 | MALQTLNSPTAPAPFNIYGDEEDVELHALESWAKRKRTRRPLIENPPTEEEYLALCLIMLAQSGSNNSSNNKSSVVQFREVQEPPSRPPLRLSYKCSVCSKAFPSYQALGGHKASHRKSSSPSEANNASTSTTTTSIAAVTTTSAGSGRAHECSICHKSFPTGQALGGHKRCHYDGGNNSSIAVTSSEGGVSTSNFHGHRGFDLNLPAPLPEVLWPVMGRDKGKNSSKFSEEQEVESPLQFAKKARLLLSKT* | 253 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte9g01353 | 252 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 153 | 173 | IPR013087 | - | |
Pte9g01353 | 252 | Gene3D | Classic Zinc Finger | 92 | 173 | - | - | |
Pte9g01353 | 252 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 151 | 173 | IPR013087 | - | |
Pte9g01353 | 252 | MobiDBLite | consensus disorder prediction | 68 | 89 | - | - | |
Pte9g01353 | 252 | MobiDBLite | consensus disorder prediction | 114 | 136 | - | - | |
Pte9g01353 | 252 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 94 | 121 | IPR013087 | - | |
Pte9g01353 | 252 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED | 35 | 211 | IPR044653 | GO:0003700 | |
Pte9g01353 | 252 | SMART | c2h2final6 | 94 | 116 | IPR013087 | - | |
Pte9g01353 | 252 | SMART | c2h2final6 | 151 | 173 | IPR013087 | - | |
Pte9g01353 | 252 | MobiDBLite | consensus disorder prediction | 110 | 136 | - | - | |
Pte9g01353 | 252 | Pfam | C2H2-type zinc finger | 150 | 175 | - | - | |
Pte9g01353 | 252 | Pfam | C2H2-type zinc finger | 94 | 118 | - | - | |
Pte9g01353 | 252 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 96 | 116 | IPR013087 | - | |
Pte9g01353 | 252 | SUPERFAMILY | beta-beta-alpha zinc fingers | 94 | 173 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte9g01353 | Pte-Chr9 | 34911956 | 34912949 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte9g01353 | 1 | 247 | C2H2 Transcription Factor Family | AT1G27730 | 43.083 | 6.94e-51 | 164 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pte9g01353 | zf-C2H2_6 | 5.3e-13 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte9g01353 | - | - | qsa:O6P43_011810 | 266.929 |