Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01351 ATGGAGCAATTTGAGGGTATTTGTGAAGGAGAGTGGAGCTATCTAAGTGGGATGTACACAGCAAAGAGGCTGAATTTATGGCCCACTTGCTTACTAACTCTTGTGTTCCAAATGAGAGTGAAGGAACTTTTGCTTTTGGGTCCTGAAGACGACTCATATCTTGTTGATGGCGATGAATGCAATATGGAGGAGTCAGAACCTGACCACGAGAAACCAGTTTTTCCAGGTGAAAATTTTCAGACGATTGCCGACAATGAGACACCTGTGCTTGAAAGTTCTGCAGAAGATAAAAAGCAACAAGAAGGAGAGAGGAATGTGAAATCAAGAAAGAGTCCTAAAGCCTCTGCAAGCACCCAGAGGAAGAGTGCAAGAAGTAACTGTTCAGAAGATGAATCCAATGCCTCTCAGGAGTTAAATGGTAGGAGCTCTTCAAGTTTAAGCCACACAGAGGCTGCAGCCACCAACTTAAATGGGAAAAGTACTAGAGCCAGTAGAGGTGCGGCTACGGATCCACAGAGCTTGTATGCAAGGGTTGGGGCTGCAACTTCAAAGCATCTCTACAAAAGAAGAGAAAGAATAAATGAGAGATTGAGAATCCTGCAGACCCTTGTCCCTAATGGAACCAAGGTTGACATTAGCACCATGCTTGAGGAAGCTGTCCAGTATGTGAAATTTCTTCAGCTACAAATTAAGCTCGAGTTCTAA 705 0.4383 MEQFEGICEGEWSYLSGMYTAKRLNLWPTCLLTLVFQMRVKELLLLGPEDDSYLVDGDECNMEESEPDHEKPVFPGENFQTIADNETPVLESSAEDKKQQEGERNVKSRKSPKASASTQRKSARSNCSEDESNASQELNGRSSSSLSHTEAAATNLNGKSTRASRGAATDPQSLYARVGAATSKHLYKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLEF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01351 234 Gene3D - 187 233 IPR036638 GO:0046983
Pte9g01351 234 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 79 232 - -
Pte9g01351 234 MobiDBLite consensus disorder prediction 111 168 - -
Pte9g01351 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 231 IPR036638 GO:0046983
Pte9g01351 234 SMART finulus 184 232 IPR011598 GO:0046983
Pte9g01351 234 CDD bHLH_AtIND_like 168 232 - -
Pte9g01351 234 FunFam Basic helix-loop-helix transcription factor 168 233 - -
Pte9g01351 234 MobiDBLite consensus disorder prediction 90 110 - -
Pte9g01351 234 Pfam Helix-loop-helix DNA-binding domain 188 227 IPR011598 GO:0046983
Pte9g01351 234 MobiDBLite consensus disorder prediction 56 171 - -
Pte9g01351 234 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 177 226 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01351 Pte-Chr9 34892500 34894108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01351 90 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 58.333 1.87e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte9g01351 HLH 3.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01351 - - rcu:8272269 174.866