Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01344 ATGGATCCCGTCATCTCGCTTTTGACCCTCCATTTCCACCGTTGTCTGAAAATGTCTGAGTCACCTCGCCACTCTGCGACCAACACTAGCTCGTTTTGCGTCGAACACCCCATTGACGCGGTTTCTTCAACACCGCCACCGCAGTATTCCCCGCCTTCCGATGATACTACCATCGCCAATCTCATCGACAATGAGTCCAACCATTTGCCCCACCCTGATTACCTGCTACGTTTTCGTAGCCATCTGATGGATACCTCTGTTCGCCAATCCTCCATTGATTGGATCTTGAAGGTGCACCGTTTCTTTCATTTTCGACCTGTAACGGCCTTTCTCTCCATCAACTACTTCGACCGTCTTCTCTCAACCCATTCTCTTCCGAAACCGAATGGATGGCCGTTTCAATTGCTATCAGTAGCTTGTTTGTCTTTAGCTGCCAAAATGGAGGAACCACAAGTGCCGTTGCTGCTGGATCTTCAGATATTCGAACCCAAGTTCATATTCGAACCTAAAACCATTCAAAGGACGGAGCTATGGGTCATGACCCATCTCAATTGGAGACTTCGCTCTATCACTCCTTTCGATTACCTCGAATACTTCATTGCCAAGCTTCCTTCTTCATCCAATCCACAACCCGAATTCCAGACTCGGATCTTGTCCACTGCTTCAGACCTCATCATCAGCACCACACGCGTGATCGATTTCTTGGGTTTCACGCCTTCCTCTATAGCAGCGGCAGCGGTGCTTTGTTCAGCCGGAGAGAGCTGGACTTCTGTGACTGATAACAACCAATGGCCAGCGATTTTTCACGACAGAGTAAACAAAGAAAAGGTAAGAAGCTGTCACCAACTAATGGAGGAGTGCGTTGTGGACACGTGTCCAACTTCCGGCAACAGAGTACTAGGAGCCGAGCCGGCGCCGCCTTCTAGTCCTGTTGGCGTGCTCGATGCCGTTGGGAGTATTAGCTATGACACGCTTTCCGATGTCCCCGGATCCAGCGGCCAAGACGGCTCAGCTAAAAGGCCTCGCTCTTCTGCTGCGGATGTACATTATTAA 1053 0.5005 MDPVISLLTLHFHRCLKMSESPRHSATNTSSFCVEHPIDAVSSTPPPQYSPPSDDTTIANLIDNESNHLPHPDYLLRFRSHLMDTSVRQSSIDWILKVHRFFHFRPVTAFLSINYFDRLLSTHSLPKPNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPKFIFEPKTIQRTELWVMTHLNWRLRSITPFDYLEYFIAKLPSSSNPQPEFQTRILSTASDLIISTTRVIDFLGFTPSSIAAAAVLCSAGESWTSVTDNNQWPAIFHDRVNKEKVRSCHQLMEECVVDTCPTSGNRVLGAEPAPPSSPVGVLDAVGSISYDTLSDVPGSSGQDGSAKRPRSSAADVHY* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01344 350 CDD CYCLIN_AtCycD-like_rpt2 190 284 - -
Pte9g01344 350 Gene3D - 59 281 - -
Pte9g01344 350 ProSitePatterns Cyclins signature. 88 119 IPR006671 -
Pte9g01344 350 MobiDBLite consensus disorder prediction 325 350 - -
Pte9g01344 350 Pfam Cyclin, C-terminal domain 190 288 IPR004367 -
Pte9g01344 350 SMART cyclin_7 93 181 IPR013763 -
Pte9g01344 350 SUPERFAMILY Cyclin-like 192 285 IPR036915 -
Pte9g01344 350 SUPERFAMILY Cyclin-like 46 187 IPR036915 -
Pte9g01344 350 Gene3D - 71 188 - -
Pte9g01344 350 FunFam D6-type cyclin 186 282 - -
Pte9g01344 350 MobiDBLite consensus disorder prediction 325 339 - -
Pte9g01344 350 PANTHER CYCLINS 60 289 IPR039361 -
Pte9g01344 350 CDD CYCLIN_AtCycD-like_rpt1 87 185 - -
Pte9g01344 350 SMART Cyclin_C_2 190 323 IPR004367 -
Pte9g01344 350 Pfam Cyclin, N-terminal domain 58 187 IPR006671 -
Pte9g01344 350 FunFam D6-type cyclin 71 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01344 Pte-Chr9 34847236 34849438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01344 26 290 Core Cell Cycle Gene Families AT1G70210 43.071 1.34e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01344 K18810 - qsa:O6P43_031142 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01344 9 34847236 34849438 Pte9g01344 9 34847236 34849438 RCT