Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01330 ATGGCTATCCACGACCAGCCTTTGCTTGAAATTCCCAGAAAGAATTCACATGATTCTCATTCTTACACCAAAACTTTCTTTCTGCTTCTTTCTTTAGTTGCCATTGTAGGAGCTACAGCTCTTGTTGCCTCTTACATGACAAAATCTGAGAACCCTATCACTTCCTCCATTCCCTGTCACCATCTTTGTCAACAAGCACTAGACCGACCAACATGTCTAAGTCTCATCTCAGAAGTAGCCAATGACATAATCATGCAAATGAGTTACAGCAATGTCAACTTACTTTTAGCATTTTTAGAGAAAACAAGGTCGCACATTGAGAAAGCTACAGAGATGGCCAGTGCAATAATATATCGCACCAATGATCGGATCGAACAAGAAGCTTTAGATACATGTGTTCAGCTTATGGACATTTCCATTGGGAGAGTACGTGATTCCATGGTTGCTATCATGAATGGGAGTGTCGATTCTCACTATGATGCACATACATGGTTAAGTGGTGTACTCACTCATCATGTCACATGCTTGGATACACTACAAGGGTCAGCGCGAACCTTGTTAGAGTCACAGCTTAATGACCTGATTGCAAGAGCTACAACCTCTCTAGACATATTTGTTACCATTTCACCATCTAAAGGTGATGTGATCAAGGAACTGAACGAAGGTTTCCCATCGTGGGTGACCAGTGAGGATCGAAAGCTCATGCAAGCTGGGGTCAAGGCTATCAAGGCGGATGTTACCGTGTCTTTGGATGGCAGTGGAAAATACACGAAGGTGAATGATGCTGTGGCACATGCTCCTGATAATAGTCCAAGAAGATACACCATTTACGTGAAGAAGGGGACATATAGAGAACATGTTGTAATTGGAACGACCAAGAAGAATTTGATGCTTATTGGTGATGGCGCCTCATCAACTATTATCACTGACAACTTAAGCAATGCGACTGGAACAAACACTTTCAATAGCGCCACTGTTGGCGTCAATGCAGATGGGTTTATAGCACAGGACATAGGGTTCCAAAACATAGCAGGCCCTCAGAATAAACAGGCAGTGGCACTCCGAGTGACCGCAGATAGAGCAGTCGTATATCGTTGCCGTATTGATGCCTACCAGGATACACTATATGCTGATGCATACAACCAATTCTATCGTGAGTCTACTATCAGTGGCACTGTGGACTTCATCTTCGGAAATGCAGCTGTTATTTTACAAAATTGCAACATTATCGTCAAAAAACCTATGAATGGCCAAAGCAATACAATAACAGCACAAGGTCGAACCATACCAAACCAAAACACTGGGATTTCCATCCAATTCTGTAAGATATTTGCTGATAGACAACTTGAACAAGTACAGACTTTGGTTCAGACATATTTAGGTCGACCATGGAAGCTTTACTCGAGAACTATGGTGATGCAGTCAACCCTTGGTACTCTCATTCACCCAACAGGATGGTCAACTTGGGACGGAAGTCAATTTGCACTCAATACATTGTACTATGCAGAGTTTAAAAATAGTGGTCCAGGTGCCAATACTAATAGGCGTGTGAAATGGCGTACTTACCATGCCGTGAGTAAAACTGAAGAAGCCATGCCTTTCACAGTAGCAAATCTCATTCAAGGAAGCAGGTGGTTGAACTCTACTGGGGTACCCTTTTGGCCAGGACTGTAG 1674 0.4289 MAIHDQPLLEIPRKNSHDSHSYTKTFFLLLSLVAIVGATALVASYMTKSENPITSSIPCHHLCQQALDRPTCLSLISEVANDIIMQMSYSNVNLLLAFLEKTRSHIEKATEMASAIIYRTNDRIEQEALDTCVQLMDISIGRVRDSMVAIMNGSVDSHYDAHTWLSGVLTHHVTCLDTLQGSARTLLESQLNDLIARATTSLDIFVTISPSKGDVIKELNEGFPSWVTSEDRKLMQAGVKAIKADVTVSLDGSGKYTKVNDAVAHAPDNSPRRYTIYVKKGTYREHVVIGTTKKNLMLIGDGASSTIITDNLSNATGTNTFNSATVGVNADGFIAQDIGFQNIAGPQNKQAVALRVTADRAVVYRCRIDAYQDTLYADAYNQFYRESTISGTVDFIFGNAAVILQNCNIIVKKPMNGQSNTITAQGRTIPNQNTGISIQFCKIFADRQLEQVQTLVQTYLGRPWKLYSRTMVMQSTLGTLIHPTGWSTWDGSQFALNTLYYAEFKNSGPGANTNRRVKWRTYHAVSKTEEAMPFTVANLIQGSRWLNSTGVPFWPGL* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01330 557 ProSitePatterns Pectinesterase signature 1. 270 289 IPR018040 -
Pte9g01330 557 Gene3D - 239 557 IPR012334 -
Pte9g01330 557 PANTHER PECTINESTERASE 36 547 - -
Pte9g01330 557 FunFam Pectinesterase 239 557 - -
Pte9g01330 557 CDD PMEI-like_4 72 209 - -
Pte9g01330 557 SMART PMEI_2 54 204 IPR006501 GO:0004857
Pte9g01330 557 Pfam Pectinesterase 245 542 IPR000070 GO:0030599|GO:0042545
Pte9g01330 557 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 209 IPR035513 -
Pte9g01330 557 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 204 IPR035513 -
Pte9g01330 557 SUPERFAMILY Pectin lyase-like 241 556 IPR011050 -
Pte9g01330 557 Pfam Plant invertase/pectin methylesterase inhibitor 61 193 IPR006501 GO:0004857
Pte9g01330 557 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Pte9g01330 557 NCBIfam pectinesterase inhibitor domain 30 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01330 Pte-Chr9 34699557 34701579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01330 1 553 Carbohydrate Esterase AT1G11580 46.619 2.98e-178 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01330 K01051 - qsa:O6P43_031215 620.542