Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01327 ATGTTTGAGCCGAACATGTTTGAAAGTCATCATCATCACATTCTCGACATGTCCCACAAGAGTTCCCCTGAGAGTACCGACTTTGGGAAAGTCGTTCGTCCTAGAGATGATGATTATGACAGCAAATCAGGTGCTGAAACCATGGAAGCTCCTTCTGGTGATGACCAAGATCCTAGTCAACCACCCAAGAAAAAACGTTACCACCGCCATACCCAACACCAGATACAAGAGATGGAAAACTTCTTCAAACAGTGCCCTCACCCAGATGACAAGCAAAGGAAAGAGCTAAGCCGTGAGCTAGGGTTGGAACCTTTGCAAATCAAGTTTTGGTTCCAAAACAAACGCACACAGATGAAGGCTCAACATGAAAGGCATGAGAATTCCATTTTGAAGGCCGAGAATGAAAAGCTTCTTGCTGAGAACAGTAGGTACAAGGAAGCCCTAAGCAATGCCTCATGCCCCAACTGTGGAGGCCCCGCTGCTCTTGGCGAAATGTCCTTCGACGAACAGCATCTCAGGATTGAGAACGCTCGTTTAAGAGAAGAAATTGATAGGATATCAGGAATTGCTGCCAAGTATGTTGGAAGGCCTATAACTACTTCCTTCTCTCACATGCCTTCCCGGTCTCTTGATCTCGTCGTTGGTAATTTTGGGAGTCAGTCAGGCATGGTTGGTGAAATGTATGGTGGTGCAGGAGATCTTCTAAGGTCAATCCCTACAGGATTAGCTGAATCTGACAGACCCATGATTGTGGAGTTAGCTGTTGCAGCAATGGAAGAACTAACAAGATTGGCGCAAGGTGGAGAGACCTTGTGGGTTACTAGTGAAAACTCAAGCACTGAGATTCTTAATGAAGATGAATACTTGAGAAGTTTCCCTAGAGGGATAGGAGGAAAATCATTGGGGTTAAAGACTGAAGCTACAAGAGAGTCTGCGGTAGTTATTATGAATTACAGTAACCTTGTCGAGATTCTGATGGATGTGAATCAATGGTCAAGAATCTTCTGCGGTATCGTTTCAAGAGCAATGACCCTAGAAGTCTTGTCAACTGGGGTGGCTGGAAATTACAATGGCGCTCTCCAAGTGATGACAGCAGAGTTCCAAGTTCCTTCACCTCTAGTCCAGTCTCGGGAGAATTATTTTGTAAGGTACTGCAAACAACATGCTGATGGCACATGGGTGGTTGTTGATGTTTCCTTGGATAGTCTAATACCCGGTTCATTGTCAAGATGTCGAAGAAGGCCATCTGGTTGTTTGATTCAGGAGTTACCAAATGGTTACTCTAAGGTTATATGGATCGAACATCTCGAGGTTGATGATCGAAATCTACCCAGTTTATACAAGCCTCTAGTCAGTTCTGGCCTTGCTTTTGGAGCTAGAAGATGGGTCGCTACATTGGATAGACAGTGTGAACGCCTTGCAAGTTCAATGGCGAACAACATTCCAGCAGGAGATCTCTGTGTGATTACTAGTCCCGATGGGAGGAAGAGTATGTTGAAACTGGCAGAGAGAATGGCATTGAGTTTTTGCGTTGGTGTTGGTGCTTCTACGGCACATGCCTGGACTACATTATCAGCAACAGGTTCTGATGATGTGAGGGTGATGACTAGAAAGAGCATGAACGATCCAGGCAGACCACCTGGTATCGTGTTGAGTGCCGCCACTTCGTTCTGGATTCCAGTTCCTCCCAGAAGGGTTTTCGACTTCCTTCGAGATGAGAACTCTCGGAGTGAGTGGGATATCCTTTCTAATGGTGGTCTTGTTCAAGAAATGGCACACATAGCTAATGGCCGTGATCCTGGCAATTGTGTGTCTTTGCTTCGAGTAAATAGTGCAAACTCAAACCAAAGCAATATGCTGATACTGCAAGAGAGTTGCACCGACTCTACAGGCTCGTACGTGATATATGCCCCAGTTGATATTGAAGCCATGAATGTGGTCTTAAGTGGTGGAGACCCAGATTACGTTGCTCTTCTGCCATCAGGTTTTGCCATACTTCCCGATGGACCTGGACTAATCAATGGAGCACCAATTCTTGATGTTGGTTCTGGGGGTTCACTTCTCACAGTTGCATTTCAGATATTGGTTGATTCAGTTCCCACAGCAAAACTATCCTTGGGGTCAGTGGCTACTGTTAACAACTTAATCAAATGTACAGCTGAAAGGATCAAGGCTGCAGTGATGTGA 2187 0.454 MFEPNMFESHHHHILDMSHKSSPESTDFGKVVRPRDDDYDSKSGAETMEAPSGDDQDPSQPPKKKRYHRHTQHQIQEMENFFKQCPHPDDKQRKELSRELGLEPLQIKFWFQNKRTQMKAQHERHENSILKAENEKLLAENSRYKEALSNASCPNCGGPAALGEMSFDEQHLRIENARLREEIDRISGIAAKYVGRPITTSFSHMPSRSLDLVVGNFGSQSGMVGEMYGGAGDLLRSIPTGLAESDRPMIVELAVAAMEELTRLAQGGETLWVTSENSSTEILNEDEYLRSFPRGIGGKSLGLKTEATRESAVVIMNYSNLVEILMDVNQWSRIFCGIVSRAMTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVQSRENYFVRYCKQHADGTWVVVDVSLDSLIPGSLSRCRRRPSGCLIQELPNGYSKVIWIEHLEVDDRNLPSLYKPLVSSGLAFGARRWVATLDRQCERLASSMANNIPAGDLCVITSPDGRKSMLKLAERMALSFCVGVGASTAHAWTTLSATGSDDVRVMTRKSMNDPGRPPGIVLSAATSFWIPVPPRRVFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSANSNQSNMLILQESCTDSTGSYVIYAPVDIEAMNVVLSGGDPDYVALLPSGFAILPDGPGLINGAPILDVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIKCTAERIKAAVM* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01327 728 FunFam Homeobox-leucine zipper protein GLABRA 2 252 471 - -
Pte9g01327 728 SUPERFAMILY Bet v1-like 246 474 - -
Pte9g01327 728 CDD homeodomain 64 122 IPR001356 GO:0003677
Pte9g01327 728 CDD START_ArGLABRA2_like 247 471 - -
Pte9g01327 728 SMART START_1 252 472 IPR002913 GO:0008289
Pte9g01327 728 ProSitePatterns 'Homeobox' domain signature. 96 119 IPR017970 GO:0000981|GO:0006355
Pte9g01327 728 Pfam Homeodomain 64 119 IPR001356 GO:0003677
Pte9g01327 728 Coils Coil 115 147 - -
Pte9g01327 728 MobiDBLite consensus disorder prediction 14 72 - -
Pte9g01327 728 MobiDBLite consensus disorder prediction 29 44 - -
Pte9g01327 728 FunFam Homeobox-leucine zipper protein HDG1 52 137 - -
Pte9g01327 728 Gene3D - 51 138 - -
Pte9g01327 728 ProSiteProfiles 'Homeobox' domain profile. 61 121 IPR001356 GO:0003677
Pte9g01327 728 Gene3D - 288 471 IPR023393 -
Pte9g01327 728 SMART HOX_1 62 125 IPR001356 GO:0003677
Pte9g01327 728 SUPERFAMILY Homeodomain-like 49 121 IPR009057 -
Pte9g01327 728 Pfam START domain 253 472 IPR002913 GO:0008289
Pte9g01327 728 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 60 727 IPR042160 -
Pte9g01327 728 SUPERFAMILY Bet v1-like 492 724 - -
Pte9g01327 728 ProSiteProfiles START domain profile. 243 475 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01327 Pte-Chr9 34677600 34681100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01327 1 727 Homeobox Transcription Factor Family AT4G04890 77.793 0.0 1163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte9g01327 START 3.2e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01327 K09338 - qsu:112016283 1229.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01327 9 34677600 34681100 Pte9g01327 9 34677600 34681100 RCT
Pte15g01922 15 25228915 25245807 Pte9g01327 9 34677600 34681100 RCT