Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01326 ATGGATACAGAAAGGTTGTTTGTTTCTAGAGAAAACCCTAGGTCGCTTGCGTTTCCGACTGCGCGTGTGGTGCCTTCAACGGCGAAGACGGTAGCGGATGTGAAATCGATGCCCAACGACATCCCTCAGAAACCTACATCTGCGTTACTCGATAGATTTAGAGCTTTGTTGAGGCAGAGGGAAGATAAATTGAGGATTTCGTGTGGAGAAGATGTTCCACCGCCTACGACTGAGGACATTGTACAGCTTTATGAGTTGGTCTTATCGGAACTTACCTTTAATTCAAAACCCATCATTACGGATCTTACCATTATTGCTGGAGAGCAAAGGGAACACGCCAGGGGCATTGCTGATGCAATTTGCTCAAGGATTCTTGAGGTCTCTCCTGAGCATAAATTGCCTTCACTCTATCTGTTGGACAGTATTGTGAAGAACATTGGCCGGGATTATGTTCAATTCTTCTCTTTACATCTACCTGAAGTATTCTGTGAGGCATACAGGCAAGTTCAACCAAACTTACATAATTCTATGCGCCATCTTTTTGGGACATGGTCAGCTGTGTTTCCTCCTTCAATCCTCCGAAAAATTGAAGCACAGCTGCAATTGTCTCAAACTGTGAACAATCCATCTGCGTTGACACCCTTGAGGACTTCTGAATCTCCTCGACCAACTCATGGCATACATGTGAACCCAAAATACTTGCGGCAGTTTGAACAAACAAATGCTGATAATATTGGAGCTGAAAGATTGAAATCAACAAGAGCTATTATTCACGCAAACTCTGGCCTCGGATCAAGTAAGATCCATCCACCTTCATCTGTCAGGCTTAGAAGGTCTACTTCACCTTCTAGAATTGGAGTGGAGAGATCTTCATTCTCATCCTTTGATGAATCTATAATTGACAATTCTAGCAGGATCATTGAGGGAGAGTCTCCATCTCAGTCTGCATTTGATTATGGCGTTGGCAATTCAACTGCTTGTGATGAGGAGTTTCCTGAATGGCGAAGGAAACAATTTAATGATGATTACCGTAGCAGAGATGAATTTCCTACCACCTATAGCCCTAGCAATGGACATGAGCCTCAAAGTCCTAGATCTCTTATCCAAGCATATGGAAGCGACAGAAGGGAAAAACCTCTGACCAATAGGAGTTTGATGGTTGAACAGATGGATGTTAATGGTATAGACAAGATGGTCGCTCGGAAATCATGGAAACATTCAGAAGAGGAGGAGTTTGACTGGGAAGATATGAGCCCAACATTAGTAGACCGTGCTAGGAATGCTGATTACTTGCCTTCAAAGCATTCTTTTCGTCCAATCGCTGGCCAACTACCCTCCTTTGCAACAGCAGATGCAGCCGTTTTGGAGCTGGATGGCAGGAACACTCGATCTAGTCCAGCTCAATTACTGCCTCTAGATGATTCATCAATTGTTGCGGAGGAATTGTATGGTCATGGTCATGGATCGGCAAGTAACTTAGGAGGATTGCAGACCAAGACAACTCAGGCCCATGGTTCTCACCGCCCCCAGGATACCTGGAATCCACCCTATAATCTACCCCAATCTTCACAATATTTGCTTCCTAGTAAGGGAAGAGGAAGAAATCTCCATACTCTTCCAGTTGAAAACCTTCCCAGAGCTGAAGTAAATCCTTATGGGCACTCACTTTTTGGTTCAAGAATCGGTTCTACTGGTCAAGATTCTGTTAACTTGGATGCTTGGTCTTCTGTTTTTCCACCAACATTTTCTACCAGGCCTCCTATTGGGCATACTACTCGCCCACCAGTAATGAATCCTCGTTTTCCATTCCAGAAAAATGTCAGGAATCAGTTTAATGCATTAAATGCTACTAATATTGTGAATCAAGGCCCGGTCAAATCTTTATTATTGTCTGAGCAGCAGTTAGATAGTTTTGAGAACAAGGATTTGAGCTTGATGAAGCCACCTCTATTACCTAGTCAGCACCTTGGACAGATCGCTGACAAGCGAGAATTTGAACGAGTTTCTACATCAAAACAGCACTTTTTACCATCTGATGATGTTCAAGAAAATTTTCTCCAAGCTGCACCTGGTCCACTTACATCCTCCTTCACTCGTCTCTCTTCGCATGGGCGAGGTCCTTCTCTAAGTGCTGTAATGTTAAATGGCTCCCCTGTCACACCGTTTGGTTTAACAAACCAAAATATTGCTAATAATTCTTTTCGGTTACAGCAGAGACCCTTACCAACGCATCTTCTAGTTCCTCCTCCTGTTTCATCAGAAATGGTACTTCAGCAAAATGCTGGTCCCATTTTGCCTATTCAACAACCAAATATCTCTGCAATTGTTAATTCCCTTATGGCTACTGGTGTCCTTTCTTTGCCTAATCAGACATCTGCACAGGATTCTCTTGGGACAGACTTCAACCCTGATGTCCTTAAAGTTCGTCATGATTCAGCAATTCGCTCTTTATATTATGATCTCCCGAGACAGTGCACAACCTGTGGCCTTCGATTCAAGTGTCAAGAGGAGCACAGTAGTCATATGGATTGGCATGTTACACGGAACAGGATGTCTAAGAACCGTAAACAGAAATCATCTCGTAAGTGGTTTGTAAGTCAGGGGATGTGGCTTAGTGGTGCAGAGGCCCTCGGCACTGAAGCTGTTCCTGGATTTTTGCCACCGGAGGCAGTGGAGGAAAAGAAAGACGATGAAGAGATGTCTGTTCCTGCTGAAGAGGAGTACAATGTATGTGCTTTGTGTGGGGAAGCTTTTGAGGAATTCTACAGTGATGAAAGTGAGGAATGGATGTATAAAGGGGCTGTTTACTTGCATGCATCTAAGGGGTCAACAGTTGGCATGGATAGGTCACAGTTAGGTCCCATCGTTCATGCAAAATGCAGGTCTGAATCTAGTGGAGTTCCCTCTGAAGATTTTAGACCGGATGAAGGGGGCACCACGGAAGAGGGTAATCAACAAAAAAGGATGCGAATTAACTATAATTAA 2985 0.4379 MDTERLFVSRENPRSLAFPTARVVPSTAKTVADVKSMPNDIPQKPTSALLDRFRALLRQREDKLRISCGEDVPPPTTEDIVQLYELVLSELTFNSKPIITDLTIIAGEQREHARGIADAICSRILEVSPEHKLPSLYLLDSIVKNIGRDYVQFFSLHLPEVFCEAYRQVQPNLHNSMRHLFGTWSAVFPPSILRKIEAQLQLSQTVNNPSALTPLRTSESPRPTHGIHVNPKYLRQFEQTNADNIGAERLKSTRAIIHANSGLGSSKIHPPSSVRLRRSTSPSRIGVERSSFSSFDESIIDNSSRIIEGESPSQSAFDYGVGNSTACDEEFPEWRRKQFNDDYRSRDEFPTTYSPSNGHEPQSPRSLIQAYGSDRREKPLTNRSLMVEQMDVNGIDKMVARKSWKHSEEEEFDWEDMSPTLVDRARNADYLPSKHSFRPIAGQLPSFATADAAVLELDGRNTRSSPAQLLPLDDSSIVAEELYGHGHGSASNLGGLQTKTTQAHGSHRPQDTWNPPYNLPQSSQYLLPSKGRGRNLHTLPVENLPRAEVNPYGHSLFGSRIGSTGQDSVNLDAWSSVFPPTFSTRPPIGHTTRPPVMNPRFPFQKNVRNQFNALNATNIVNQGPVKSLLLSEQQLDSFENKDLSLMKPPLLPSQHLGQIADKREFERVSTSKQHFLPSDDVQENFLQAAPGPLTSSFTRLSSHGRGPSLSAVMLNGSPVTPFGLTNQNIANNSFRLQQRPLPTHLLVPPPVSSEMVLQQNAGPILPIQQPNISAIVNSLMATGVLSLPNQTSAQDSLGTDFNPDVLKVRHDSAIRSLYYDLPRQCTTCGLRFKCQEEHSSHMDWHVTRNRMSKNRKQKSSRKWFVSQGMWLSGAEALGTEAVPGFLPPEAVEEKKDDEEMSVPAEEEYNVCALCGEAFEEFYSDESEEWMYKGAVYLHASKGSTVGMDRSQLGPIVHAKCRSESSGVPSEDFRPDEGGTTEEGNQQKRMRINYN* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01326 994 ProSitePatterns Zinc finger C2H2 type domain signature. 825 845 IPR013087 -
Pte9g01326 994 SMART 558neu5 79 201 IPR006569 -
Pte9g01326 994 MobiDBLite consensus disorder prediction 349 366 - -
Pte9g01326 994 MobiDBLite consensus disorder prediction 265 291 - -
Pte9g01326 994 MobiDBLite consensus disorder prediction 959 994 - -
Pte9g01326 994 MobiDBLite consensus disorder prediction 209 228 - -
Pte9g01326 994 SUPERFAMILY ENTH/VHS domain 76 201 IPR008942 -
Pte9g01326 994 MobiDBLite consensus disorder prediction 491 517 - -
Pte9g01326 994 MobiDBLite consensus disorder prediction 488 517 - -
Pte9g01326 994 Gene3D - 74 202 IPR008942 -
Pte9g01326 994 MobiDBLite consensus disorder prediction 345 366 - -
Pte9g01326 994 MobiDBLite consensus disorder prediction 964 983 - -
Pte9g01326 994 Pfam CID domain 88 195 IPR006569 -
Pte9g01326 994 MobiDBLite consensus disorder prediction 209 224 - -
Pte9g01326 994 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 59 974 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Pte9g01326 994 FunFam polyadenylation and cleavage factor homolog 4 73 201 - -
Pte9g01326 994 CDD CID_Pcf11 81 201 IPR047415 -
Pte9g01326 994 ProSiteProfiles CID domain profile. 76 204 IPR006569 -
Pte9g01326 994 MobiDBLite consensus disorder prediction 261 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01326 Pte-Chr9 34667211 34674487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01326 772 990 C2H2 Transcription Factor Family AT4G04885 66.667 2.25e-94 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01326 K14400 - qsa:O6P43_011889 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g01326 9 34667211 34674487 Pte9g01326 9 34667211 34674487 RCT