Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g01320 ATGAGCTGCTTCTCTTGTTGCAATTCCAATGTCGAAGGTGCTACATCTACCAAGAAGAGCAGGAAGGGTTTCACCAGCACCAGGAAAGGATATTTGCCCATTCACACGGCATTGTCATTGAAAACAGGTAGCAGCAGGCGGAGAACTATAGAAGCTGAGATTAAAAGAATTGGACATGCCAAAAATGCTGTGAAAACTTTCACATTTGCAGAAGTTTCTGCTGCTACCGACAATTTCAACCGGAAGCATTTAATTGGTGAAGGTGGATTTGGGCTGGTGTTTAAAGGATATTTGAAAAGCATCAACCGAGATGTAGCAGTCAAACAACTTAACAGGGAAGGAGCACAAGGAAGTAGAGAATTCTTTCAAGAGGTTTTGATGTTAAGTTTGGTGCAGCATCCAAATCTGGTCAATCTGATTGGCTATTGTGTAGATGACGACCATAGAATTCTCGTTTATGAATATATGGAAAAAGGTTGTTTGGAAAATCACCTTCTAGACATAGCTCCAGACAAGGAGCCTTTGGGTTGGCTTACAAGGATGAAGATCGCTAAAGGTGCAGCTCAAGGACTGGAATATCTGCATGATATTTCAGACCCACAAATAATTTATAGAGACTTTAAAGCATCTAATATATTATTAGATGAGGAGTTCAATCCAAAGCTCTCTGATTTTGGACTAGCTAAGCTAGGTCCAACAGAAGGCGATGACCACGTGTGTACTAGGGTAATGGGGACTTACGGCTACTGTGCACCTGAGTATGTTTTAACAGGAAAGCTAACAAAAAAGTCAGATGTCTACAGTTATGGAGTGGTGTTTCTTGAGTTGATTACTGGGAGGCGCGCGATAGACAAATCTAGGGTCACAGCAGAGCAGAACTTGATAGATTGGGCACAACCACTACTTCAGGACAGAAGAAAGTTTCCCCAGATGGCCGATCCATTACTAGATGGCAAATACCCAGTAAAGGGTCTTTTTAAAGCTCTTGCAATTGCAGCTATGTGTCTACAAGAGGATCCAGACCCTCGACCTTCAATGGCAGATGTTGTAACAGCTCTTGAGCTTCTGTGTAATGAATCAACCGAAGATGAGAGTGGCGATGGAGAAAATGTTGAATTAGTCAAAGCCACATTTGACAACGATGATCGAGAGGCATAG 1158 0.4223 MSCFSCCNSNVEGATSTKKSRKGFTSTRKGYLPIHTALSLKTGSSRRRTIEAEIKRIGHAKNAVKTFTFAEVSAATDNFNRKHLIGEGGFGLVFKGYLKSINRDVAVKQLNREGAQGSREFFQEVLMLSLVQHPNLVNLIGYCVDDDHRILVYEYMEKGCLENHLLDIAPDKEPLGWLTRMKIAKGAAQGLEYLHDISDPQIIYRDFKASNILLDEEFNPKLSDFGLAKLGPTEGDDHVCTRVMGTYGYCAPEYVLTGKLTKKSDVYSYGVVFLELITGRRAIDKSRVTAEQNLIDWAQPLLQDRRKFPQMADPLLDGKYPVKGLFKALAIAAMCLQEDPDPRPSMADVVTALELLCNESTEDESGDGENVELVKATFDNDDREA* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g01320 385 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Pte9g01320 385 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 51 155 - -
Pte9g01320 385 CDD STKc_IRAK 85 356 - -
Pte9g01320 385 ProSiteProfiles Protein kinase domain profile. 79 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01320 385 PANTHER OS07G0668900 PROTEIN 3 365 - -
Pte9g01320 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Pte9g01320 385 FunFam Serine/threonine-protein kinase PBS1 156 371 - -
Pte9g01320 385 Gene3D Transferase(Phosphotransferase) domain 1 156 382 - -
Pte9g01320 385 MobiDBLite consensus disorder prediction 360 385 - -
Pte9g01320 385 Pfam Protein kinase domain 80 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g01320 385 MobiDBLite consensus disorder prediction 368 385 - -
Pte9g01320 385 SUPERFAMILY Protein kinase-like (PK-like) 64 351 IPR011009 -
Pte9g01320 385 Gene3D Phosphorylase Kinase; domain 1 22 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g01320 Pte-Chr9 34639567 34642118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g01320 1 356 Glycoside Hydrolase AT3G07070 55.068 2.40e-136 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pte9g01320 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g01320 - - qsa:O6P43_031228 508.449